RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 RALYLQ86SE5 291 aaKnown RBP12.76□□□□□ -0.37
HERC1-204ENST00000559715 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
HERC1-204ENST00000559715 CYP2W1Q8TAV3 490 aa12.76□□□□□ -0.37
HERC1-204ENST00000559715 IL17RAQ96F46 866 aa12.76□□□□□ -0.37
HERC1-204ENST00000559715 MTA3Q9BTC8 594 aa12.76□□□□□ -0.37
HERC1-204ENST00000559715 LSG1Q9H089 658 aaKnown RBP12.76□□□□□ -0.37
HERC1-204ENST00000559715 NSUN3Q9H649 340 aaKnown RBP12.76□□□□□ -0.37
HERC1-204ENST00000559715 CACNA1HO95180 2353 aa12.76□□□□□ -0.37
HERC1-204ENST00000559715 ERICH2A1L162 156 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 PRR33A8MZF0 331 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 PRC1O43663 620 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 DGKIO75912 1065 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 RB1P06400 928 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 RXRAP19793 462 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 FUT2Q10981 343 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 SART3Q15020 963 aaKnown RBP12.75□□□□□ -0.37
HERC1-204ENST00000559715 NECTIN1Q15223 517 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 GRIK4Q16099 956 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 UBE2SQ16763 222 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 PTPROQ16827 1216 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 TAF2Q6P1X5 1199 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 DNAJB3Q8WWF6 145 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 RUFY2Q8WXA3 655 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
HERC1-204ENST00000559715 RRP36Q96EU6 259 aaKnown RBP12.75□□□□□ -0.37
HERC1-204ENST00000559715 ZNF215Q9UL58 517 aaPredicted RBP12.75□□□□□ -0.37
HERC1-204ENST00000559715 ADGRA3Q8IWK6 1321 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 TBX10O75333 385 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 INSRRP14616 1297 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 MARK3P27448 753 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 IRS1P35568 1242 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 LIFRP42702 1097 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 PPFIA1Q13136 1202 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 PUS10Q3MIT2 529 aaKnown RBP12.74□□□□□ -0.37
HERC1-204ENST00000559715 NLRX1Q86UT6 975 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 FIBCD1Q8N539 461 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 GIMAP8Q8ND71 665 aaPredicted RBP12.74□□□□□ -0.37
HERC1-204ENST00000559715 LZTS2Q9BRK4 669 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 PSTPIP2Q9H939 334 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 JADE2Q9NQC1 790 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 ERAP1Q9NZ08 941 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 TUBE1Q9UJT0 475 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 CDY2AQ9Y6F7 541 aa12.74□□□□□ -0.37
HERC1-204ENST00000559715 MYH9P35579 1960 aaKnown RBP12.73□□□□□ -0.37
HERC1-204ENST00000559715 LINC01565O15544 149 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 CD52P31358 61 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 KIF5BP33176 963 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 CTNNB1P35222 781 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 ITGB3BPQ13352 177 aaPredicted RBP12.73□□□□□ -0.37
HERC1-204ENST00000559715 SMAD2Q15796 467 aaKnown RBP12.73□□□□□ -0.37
HERC1-204ENST00000559715 TSHZ1Q6ZSZ6 1077 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 TMTC3Q6ZXV5 915 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 SGMS1Q86VZ5 419 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 RAB11FIP4Q86YS3 637 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 ADHFE1Q8IWW8 467 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 CTCFLQ8NI51 663 aaPredicted RBP12.73□□□□□ -0.37
HERC1-204ENST00000559715 MSLNLQ96KJ4 702 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 LMAN2LQ9H0V9 348 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 TMX1Q9H3N1 280 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 KCNH7Q9NS40 1196 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 PRKAG3Q9UGI9 489 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 PCDHA6Q9UN73 950 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 PLAGL2Q9UPG8 496 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 HCN4Q9Y3Q4 1203 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 PCDHA8Q9Y5H6 950 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 SQORQ9Y6N5 450 aa12.73□□□□□ -0.37
HERC1-204ENST00000559715 IGKV6D-21A0A0A0MT36 114 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 SLC27A2O14975 620 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 MAFGO15525 162 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 MBTPS2O43462 519 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 ATG7O95352 703 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 ARP10275 920 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 MCM5P33992 734 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 MRPS6P82932 125 aaKnown RBP12.72□□□□□ -0.37
HERC1-204ENST00000559715 ADAM15Q13444 863 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 MTMR1Q13613 665 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 PLCB4Q15147 1175 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 FANCBQ8NB91 859 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 SPPL3Q8TCT6 385 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 TRAPPC12Q8WVT3 735 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 CUL5Q93034 780 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 CDHR1Q96JP9 859 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 TMEM87BQ96K49 555 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 LRRC2Q9BYS8 371 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 SMARCAD1Q9H4L7 1026 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 ALG13Q9NP73 1137 aaKnown RBP12.72□□□□□ -0.37
HERC1-204ENST00000559715 CLDND1Q9NY35 253 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
HERC1-204ENST00000559715 MRPL42Q9Y6G3 142 aaKnown RBP12.72□□□□□ -0.37
HERC1-204ENST00000559715 ZFHX2Q9C0A1 2572 aaPredicted RBP12.72□□□□□ -0.37
HERC1-204ENST00000559715 IGSF9BQ9UPX0 1349 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 KDM3AQ9Y4C1 1321 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 ZBTB42B2RXF5 422 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 ADAMTS3O15072 1205 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 DCXO43602 365 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 CCNE2O96020 404 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 MMP1P03956 469 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 ITGB1P05556 798 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 ALADP13716 330 aa12.71□□□□□ -0.37
HERC1-204ENST00000559715 SSTR3P32745 418 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms