RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 HOMER1Q86YM7 354 aa12.81□□□□□ -0.36
RABGGTA-204ENST00000558376 CHAMP1Q96JM3 812 aa12.81□□□□□ -0.36
RABGGTA-204ENST00000558376 PIGSQ96S52 555 aa12.81□□□□□ -0.36
RABGGTA-204ENST00000558376 TRIOO75962 3097 aa12.81□□□□□ -0.36
RABGGTA-204ENST00000558376 C5orf42Q9H799 3197 aa12.81□□□□□ -0.36
RABGGTA-204ENST00000558376 IFIT3O14879 490 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 CYTH3O43739 400 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 JAK2O60674 1132 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 ICAM3P32942 547 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 LTBRP36941 435 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 ADAM17P78536 824 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 NFKBIBQ15653 356 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 FAM26DQ5JW98 314 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 TRIM50Q86XT4 487 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 TNPO1Q92973 898 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 GPR20Q99678 358 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 NSUN3Q9H649 340 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 RIOX1Q9H6W3 641 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 TTC3P53804 2025 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 COL4A6Q14031 1691 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 KLF18A0A0U1RQI7 1052 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 C19orf67A6NJJ6 358 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 SPATA31C2B4DYI2 1134 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 SH2B2O14492 632 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 DCXO43602 365 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 CAND2O75155 1236 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 LINC00271P0C7V0 271 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 GJB2P29033 226 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 ZP2Q05996 745 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 GRM4Q14833 912 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 CYFIP1Q7L576 1253 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 GTF3C6Q969F1 213 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 MYL10Q9BUA6 226 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 IFIH1Q9BYX4 1025 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 CNNM2Q9H8M5 875 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 RTEL1Q9NZ71 1219 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 SMC3Q9UQE7 1217 aa12.8□□□□□ -0.36
RABGGTA-204ENST00000558376 TECTAO75443 2155 aa12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 GRM6O15303 877 aa12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 PFKFB2O60825 505 aa12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 CHRNA1P02708 482 aa12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 UTP14CQ5TAP6 766 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 METTL7BQ6UX53 244 aa12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 RPAINQ86UA6 219 aa12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 FBXL16Q8N461 479 aa12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 LY9Q9HBG7 655 aa12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 CLDND1Q9NY35 253 aa12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 FRMPD4Q14CM0 1322 aa12.79□□□□□ -0.36
RABGGTA-204ENST00000558376 NOP56O00567 594 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 CTDNEP1O95476 244 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 CTNNB1P35222 781 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 ARHGAP4P98171 946 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 DLX2Q07687 328 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 CTC1Q2NKJ3 1217 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 FIBCD1Q8N539 461 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 ZNF274Q96GC6 653 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 CIZ1Q9ULV3 898 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 PNMA6FA0A0J9YX94 578 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 GNAT1P11488 350 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 BMPR1AP36894 532 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 EVCP57679 992 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 HYAL1Q12794 435 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 NEDD9Q14511 834 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 CSPP1Q1MSJ5 1256 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 FOXD4L6Q3SYB3 417 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 FOXD4L3Q6VB84 417 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 NFXL1Q6ZNB6 911 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 RUFY4Q6ZNE9 571 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 ADHFE1Q8IWW8 467 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 LMBR1Q8WVP7 490 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 APBB2Q92870 758 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 PRKAG3Q9UGI9 489 aa12.78□□□□□ -0.36
RABGGTA-204ENST00000558376 LOXHD1Q8IVV2 1947 aa12.77□□□□□ -0.36
RABGGTA-204ENST00000558376 C5orf67F2Z3F1 127 aa12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 RB1P06400 928 aa12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 SYT1P21579 422 aa12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 IRS1P35568 1242 aa12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 ADD1P35611 737 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 CLUL1Q15846 466 aa12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 GNPTABQ3T906 1256 aa12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 PIBF1Q8WXW3 757 aa12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 TMEM87BQ96K49 555 aa12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 FBXL18Q96ME1 805 aa12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 EHMT1Q9H9B1 1298 aa12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 WDFY4Q6ZS81 3184 aa12.77□□□□□ -0.37
RABGGTA-204ENST00000558376 GOLGA8BA8MQT2 603 aa12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 ENPP3O14638 875 aa12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 FIBPO43427 364 aa12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 GHRP10912 638 aa12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 GTF2F1P35269 517 aaKnown RBP eCLIP12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 MRE11P49959 708 aa12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 SP4Q02446 784 aa12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 NHLH1Q02575 133 aa12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 MGAT3Q09327 533 aa12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 TROAPQ12815 778 aa12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 TRAF1Q13077 416 aa12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 RC3H2Q9HBD1 1191 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-204ENST00000558376 FAM50BQ9Y247 325 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms