RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PFKFB3Q16875 520 aaPredicted RBP7.76□□□□□ -1.17
SLIRP-204ENST00000555890 RSPO4Q2I0M5 234 aaPredicted RBP7.76□□□□□ -1.17
SLIRP-204ENST00000555890 CFAP100Q494V2 611 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 NYAP1Q6ZVC0 841 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 FRMD5Q7Z6J6 570 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 SRBD1Q8N5C6 995 aaKnown RBP7.76□□□□□ -1.17
SLIRP-204ENST00000555890 TSEN2Q8NCE0 465 aaKnown RBP7.76□□□□□ -1.17
SLIRP-204ENST00000555890 MRPS27Q92552 414 aaKnown RBP7.76□□□□□ -1.17
SLIRP-204ENST00000555890 PHF20Q9BVI0 1012 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 CLSTN2Q9H4D0 955 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 DDX4Q9NQI0 724 aaKnown RBP7.76□□□□□ -1.17
SLIRP-204ENST00000555890 SH3GLB2Q9NR46 395 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 DACT1Q9NYF0 836 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 PI4KBQ9UBF8 816 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 NOL7Q9UMY1 257 aaKnown RBP7.76□□□□□ -1.17
SLIRP-204ENST00000555890 PCDHA7Q9UN72 937 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 KCNJ14Q9UNX9 436 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 CEP131Q9UPN4 1083 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 CLIC4Q9Y696 253 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 VPS13AQ96RL7 3174 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 MYH4Q9Y623 1939 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 CNTNAP5Q8WYK1 1306 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 PIEZO2Q9H5I5 2752 aa7.76□□□□□ -1.17
SLIRP-204ENST00000555890 SMG1Q96Q15 3661 aaKnown RBP7.75□□□□□ -1.17
SLIRP-204ENST00000555890 TMEM221A6NGB7 291 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 KLRF2D3W0D1 207 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 M0R296 226 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 FAM13AO94988 1023 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 BMP15O95972 392 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 CETPP11597 493 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 POU3F3P20264 500 aaPredicted RBP7.75□□□□□ -1.17
SLIRP-204ENST00000555890 SDHBP21912 280 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 NOVP48745 357 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 FCGRTP55899 365 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 NLRP5P59047 1200 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 COPS2P61201 443 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 FAM160A1Q05DH4 1040 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 UVSSAQ2YD98 709 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 GALNT17Q6IS24 598 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 SASS6Q6UVJ0 657 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 FSIP1Q8NA03 581 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 CCDC148Q8NFR7 591 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 HELQQ8TDG4 1101 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 BAP1Q92560 729 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 FOXJ1Q92949 421 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 CEP95Q96GE4 821 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 FTOQ9C0B1 505 aaKnown RBP eCLIP7.75□□□□□ -1.17
SLIRP-204ENST00000555890 RBSNQ9H1K0 784 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 MTMR4Q9NYA4 1195 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 VPS54Q9P1Q0 977 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 MAD2L2Q9UI95 211 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 MSRAQ9UJ68 235 aa7.75□□□□□ -1.17
SLIRP-204ENST00000555890 BAZ2BQ9UIF8 2168 aaKnown RBP7.75□□□□□ -1.17
SLIRP-204ENST00000555890 IGKV6D-41A0A0C4DH26 115 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 hCG_1642624A0A1W2PR95 340 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 MPHOSPH10O00566 681 aaKnown RBP7.74□□□□□ -1.17
SLIRP-204ENST00000555890 NRG2O14511 850 aaPredicted RBP7.74□□□□□ -1.17
SLIRP-204ENST00000555890 CUTAO60888 179 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 LGR5O75473 907 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 CAVIN2O95810 425 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 TTLL1O95922 423 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 AKR1B1P15121 316 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 NPR3P17342 541 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 CMA1P23946 247 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 FLT3LGP49771 235 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 TCP10Q12799 353 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 NFIAQ12857 509 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 MTMR3Q13615 1198 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 ASPRV1Q53RT3 343 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 CCDC12Q8WUD4 166 aaPredicted RBP7.74□□□□□ -1.17
SLIRP-204ENST00000555890 EDAQ92838 391 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 RRP36Q96EU6 259 aaKnown RBP7.74□□□□□ -1.17
SLIRP-204ENST00000555890 SPZ1Q9BXG8 430 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 C1QTNF2Q9BXJ5 285 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 TDRD3Q9H7E2 651 aaKnown RBP7.74□□□□□ -1.17
SLIRP-204ENST00000555890 SLC28A3Q9HAS3 691 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 VEZTQ9HBM0 779 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.74□□□□□ -1.17
SLIRP-204ENST00000555890 ZNF70Q9UC06 446 aaPredicted RBP7.74□□□□□ -1.17
SLIRP-204ENST00000555890 CLIP2Q9UDT6 1046 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 SEC63Q9UGP8 760 aaKnown RBP7.74□□□□□ -1.17
SLIRP-204ENST00000555890 MTCH2Q9Y6C9 303 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 MYO9BQ13459 2157 aa7.74□□□□□ -1.17
SLIRP-204ENST00000555890 GREB1LQ9C091 1923 aaPredicted RBP7.74□□□□□ -1.17
SLIRP-204ENST00000555890 TRIM75PA6NK02 468 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 hCG_1984214I3L0E3 225 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 MYO1BO43795 1136 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 PROS1P07225 676 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 AVPR2P30518 371 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 SHMT1P34896 483 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 TRAPPC10P48553 1259 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 CACNB3P54284 484 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 CCDC173Q0VFZ6 552 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 PPIL2Q13356 520 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 PTPAQ15257 358 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 ZRSR1Q15695 479 aaKnown RBP7.73□□□□□ -1.17
SLIRP-204ENST00000555890 RAB30Q15771 203 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 CAMK4Q16566 473 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 TSNAXIP1Q2TAA8 658 aa7.73□□□□□ -1.17
SLIRP-204ENST00000555890 CERKLQ49MI3 558 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms