RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 TELO2Q9Y4R8 837 aa16.86■□□□□ 0.29
GPN3-206ENST00000549963 NRCAMQ92823 1304 aa16.86■□□□□ 0.29
GPN3-206ENST00000549963 IGKV6D-21A0A0A0MT36 114 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 RRN3P2A6NIE6 340 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 DKC1O60832 514 aaKnown RBP eCLIP16.85■□□□□ 0.29
GPN3-206ENST00000549963 TIMP1P01033 207 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 MARK3P27448 753 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 BFSP2Q13515 415 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 ZNF174Q15697 407 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 GDF6Q6KF10 455 aaPredicted RBP16.85■□□□□ 0.29
GPN3-206ENST00000549963 BRAPQ7Z569 592 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 TRIM50Q86XT4 487 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 AFAP1L1Q8TED9 768 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 ATP6V0A1Q93050 837 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 UNC45AQ9H3U1 944 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 HIPK3Q9H422 1215 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 RNPEPQ9H4A4 650 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 NRBP2Q9NSY0 501 aa16.85■□□□□ 0.29
GPN3-206ENST00000549963 TRIP12Q14669 1992 aaPredicted RBP16.84■□□□□ 0.29
GPN3-206ENST00000549963 POTEB3A0JP26 581 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 TRIM43BA6NCK2 446 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 KIF28PB7ZC32 967 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 HBP1O60381 514 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 SYT1P21579 422 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 TXKP42681 527 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 PPFIA1Q13136 1202 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 PPP2R5CQ13362 524 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 POTEBQ6S5H4 581 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 SH3RF1Q7Z6J0 888 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 TMEM199Q8N511 208 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 PPP1R13LQ8WUF5 828 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 GJA10Q969M2 543 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 TRIM43Q96BQ3 446 aaPredicted RBP16.84■□□□□ 0.29
GPN3-206ENST00000549963 FAM167AQ96KS9 214 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 GABBR1Q9UBS5 961 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 TBX21Q9UL17 535 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 WDR81Q562E7 1941 aa16.84■□□□□ 0.29
GPN3-206ENST00000549963 PTK7Q13308 1070 aa16.83■□□□□ 0.28
GPN3-206ENST00000549963 TMEM266Q2M3C6 531 aa16.83■□□□□ 0.28
GPN3-206ENST00000549963 CAGE1Q8TC20 777 aa16.83■□□□□ 0.28
GPN3-206ENST00000549963 HAS1Q92839 578 aa16.83■□□□□ 0.28
GPN3-206ENST00000549963 PCYT2Q99447 389 aa16.83■□□□□ 0.28
GPN3-206ENST00000549963 TTC12Q9H892 705 aaPredicted RBP16.83■□□□□ 0.28
GPN3-206ENST00000549963 SETD4Q9NVD3 440 aa16.83■□□□□ 0.28
GPN3-206ENST00000549963 MAFBQ9Y5Q3 323 aaPredicted RBP16.83■□□□□ 0.28
GPN3-206ENST00000549963 LAD1O00515 517 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 CYP2C9P11712 490 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 MDM2Q00987 491 aaPredicted RBP16.82■□□□□ 0.28
GPN3-206ENST00000549963 PLCB4Q15147 1175 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 GRIK4Q16099 956 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 ZNF484Q5JVG2 852 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 MFSD5Q6N075 450 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 CCDC60Q8IWA6 550 aaPredicted RBP16.82■□□□□ 0.28
GPN3-206ENST00000549963 ATP8B4Q8TF62 1192 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 BBXQ8WY36 941 aaPredicted RBP16.82■□□□□ 0.28
GPN3-206ENST00000549963 BADQ92934 168 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 MTMR9Q96QG7 549 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 RAB34Q9BZG1 259 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 PPP1R12CQ9BZL4 782 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 CEP131Q9UPN4 1083 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 CEP290O15078 2479 aa16.82■□□□□ 0.28
GPN3-206ENST00000549963 PITPNM1O00562 1244 aa16.81■□□□□ 0.28
GPN3-206ENST00000549963 STX6O43752 255 aa16.81■□□□□ 0.28
GPN3-206ENST00000549963 RPLP2P05387 115 aaKnown RBP16.81■□□□□ 0.28
GPN3-206ENST00000549963 P4HBP07237 508 aaKnown RBP16.81■□□□□ 0.28
GPN3-206ENST00000549963 OR52Z1P0C646 297 aa16.81■□□□□ 0.28
GPN3-206ENST00000549963 INSRRP14616 1297 aa16.81■□□□□ 0.28
GPN3-206ENST00000549963 MAGEA10P43363 369 aaPredicted RBP16.81■□□□□ 0.28
GPN3-206ENST00000549963 PSMC5P62195 406 aa16.81■□□□□ 0.28
GPN3-206ENST00000549963 IGBP1P78318 339 aa16.81■□□□□ 0.28
GPN3-206ENST00000549963 FPGSQ05932 587 aa16.81■□□□□ 0.28
GPN3-206ENST00000549963 EPHA7Q15375 998 aa16.81■□□□□ 0.28
GPN3-206ENST00000549963 NCAPH2Q6IBW4 605 aa16.81■□□□□ 0.28
GPN3-206ENST00000549963 RSPH3Q86UC2 560 aa16.81■□□□□ 0.28
GPN3-206ENST00000549963 RPUSD2Q8IZ73 545 aaKnown RBP16.81■□□□□ 0.28
GPN3-206ENST00000549963 NOC4LQ9BVI4 516 aaKnown RBP16.81■□□□□ 0.28
GPN3-206ENST00000549963 ZSCAN16Q9H4T2 348 aaPredicted RBP16.81■□□□□ 0.28
GPN3-206ENST00000549963 VAV3Q9UKW4 847 aa16.81■□□□□ 0.28
GPN3-206ENST00000549963 COL1A2P08123 1366 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 TREHO43280 583 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 PARNO95453 639 aaKnown RBP16.8■□□□□ 0.28
GPN3-206ENST00000549963 CYP2C18P33260 490 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 QARSP47897 775 aaKnown RBP16.8■□□□□ 0.28
GPN3-206ENST00000549963 TOB1P50616 345 aaPredicted RBP16.8■□□□□ 0.28
GPN3-206ENST00000549963 ZNF200P98182 395 aaPredicted RBP16.8■□□□□ 0.28
GPN3-206ENST00000549963 PTGDRQ13258 359 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 PPIGQ13427 754 aaKnown RBP eCLIP16.8■□□□□ 0.28
GPN3-206ENST00000549963 TAF2Q6P1X5 1199 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 B3GNT9Q6UX72 402 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 TRMT1LQ7Z2T5 733 aaKnown RBP16.8■□□□□ 0.28
GPN3-206ENST00000549963 SERINC5Q86VE9 423 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 SPRYD3Q8NCJ5 442 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 ERMNQ8TAM6 284 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 LMBR1Q8WVP7 490 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 UBE2OQ9C0C9 1292 aaKnown RBP16.8■□□□□ 0.28
GPN3-206ENST00000549963 TUBE1Q9UJT0 475 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 PCDHB6Q9Y5E3 794 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 STK24Q9Y6E0 443 aa16.8■□□□□ 0.28
GPN3-206ENST00000549963 BMP15O95972 392 aa16.79■□□□□ 0.28
GPN3-206ENST00000549963 HOXC8P31273 242 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms