RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 FOXK2Q01167 660 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 ST3GAL1Q11201 340 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 AP3B2Q13367 1082 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 IKBKEQ14164 716 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 STXBP2Q15833 593 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 HSCBQ8IWL3 235 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 BANK1Q8NDB2 785 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 SNX21Q969T3 373 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 CTAGE1Q96RT6 745 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 COL20A1Q9P218 1284 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 MUTYHQ9UIF7 546 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 INSL6Q9Y581 213 aa15.27■□□□□ 0.04
RAB5B-203ENST00000546810 JAK2O60674 1132 aa15.26■□□□□ 0.03
RAB5B-203ENST00000546810 EDNRBP24530 442 aa15.26■□□□□ 0.03
RAB5B-203ENST00000546810 CCND2P30279 289 aa15.26■□□□□ 0.03
RAB5B-203ENST00000546810 UBE2SQ16763 222 aa15.26■□□□□ 0.03
RAB5B-203ENST00000546810 HERC4Q5GLZ8 1057 aaPredicted RBP15.26■□□□□ 0.03
RAB5B-203ENST00000546810 TCEAL5Q5H9L2 206 aa15.26■□□□□ 0.03
RAB5B-203ENST00000546810 GDF6Q6KF10 455 aaPredicted RBP15.26■□□□□ 0.03
RAB5B-203ENST00000546810 REXO1Q8N1G1 1221 aaKnown RBP15.26■□□□□ 0.03
RAB5B-203ENST00000546810 DHX38Q92620 1227 aaKnown RBP15.26■□□□□ 0.03
RAB5B-203ENST00000546810 COPS5Q92905 334 aa15.26■□□□□ 0.03
RAB5B-203ENST00000546810 BRMS1Q9HCU9 246 aa15.26■□□□□ 0.03
RAB5B-203ENST00000546810 K7ELQ4 463 aaPredicted RBP15.25■□□□□ 0.03
RAB5B-203ENST00000546810 STAM2O75886 525 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 NR3C2P08235 984 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 CKBP12277 381 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 FDPSP14324 419 aaKnown RBP15.25■□□□□ 0.03
RAB5B-203ENST00000546810 RBL2Q08999 1139 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 COL19A1Q14993 1142 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 EPC2Q52LR7 807 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 IER5LQ5T953 404 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 XRRA1Q6P2D8 792 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 SESTD1Q86VW0 696 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 SCFD2Q8WU76 684 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 AIFM3Q96NN9 605 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 SAMD11Q96NU1 681 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 POP1Q99575 1024 aaKnown RBP15.25■□□□□ 0.03
RAB5B-203ENST00000546810 PRRX2Q99811 253 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 PDCD2LQ9BRP1 358 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 CLDND1Q9NY35 253 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 PCDHA6Q9UN73 950 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 PCDHA4Q9UN74 947 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 PCDHA8Q9Y5H6 950 aa15.25■□□□□ 0.03
RAB5B-203ENST00000546810 EIF3JO75822 258 aaKnown RBP15.24■□□□□ 0.03
RAB5B-203ENST00000546810 MYCLP12524 364 aaPredicted RBP15.24■□□□□ 0.03
RAB5B-203ENST00000546810 CLK2P49760 499 aaKnown RBP15.24■□□□□ 0.03
RAB5B-203ENST00000546810 PGM5Q15124 567 aa15.24■□□□□ 0.03
RAB5B-203ENST00000546810 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.24■□□□□ 0.03
RAB5B-203ENST00000546810 BMP8AQ7Z5Y6 402 aa15.24■□□□□ 0.03
RAB5B-203ENST00000546810 BLIDQ8IZY5 108 aa15.24■□□□□ 0.03
RAB5B-203ENST00000546810 DAGLBQ8NCG7 672 aa15.24■□□□□ 0.03
RAB5B-203ENST00000546810 EDAQ92838 391 aa15.24■□□□□ 0.03
RAB5B-203ENST00000546810 NSUN3Q9H649 340 aaKnown RBP15.24■□□□□ 0.03
RAB5B-203ENST00000546810 SMC3Q9UQE7 1217 aa15.24■□□□□ 0.03
RAB5B-203ENST00000546810 LCTP09848 1927 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 FRMPD4Q14CM0 1322 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 H3BNC9 293 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 GFRA3O60609 400 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 AMHP03971 560 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 TXNP10599 105 aaKnown RBP15.23■□□□□ 0.03
RAB5B-203ENST00000546810 HTRA4P83105 476 aaPredicted RBP15.23■□□□□ 0.03
RAB5B-203ENST00000546810 TCF15Q12870 199 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 GPM6BQ13491 265 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 CUL4AQ13619 759 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 SAFBQ15424 915 aaKnown RBP eCLIP15.23■□□□□ 0.03
RAB5B-203ENST00000546810 SMAD2Q15796 467 aaKnown RBP15.23■□□□□ 0.03
RAB5B-203ENST00000546810 JAKMIP3Q5VZ66 844 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 PCNX4Q63HM2 1172 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 VSIG10LQ86VR7 867 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 RNF135Q8IUD6 432 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 SP7Q8TDD2 431 aaPredicted RBP15.23■□□□□ 0.03
RAB5B-203ENST00000546810 C8orf76Q96K31 380 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 PHF20Q9BVI0 1012 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 ANO3Q9BYT9 981 aa15.23■□□□□ 0.03
RAB5B-203ENST00000546810 TRIP12Q14669 1992 aaPredicted RBP15.22■□□□□ 0.03
RAB5B-203ENST00000546810 NCK2O43639 380 aa15.22■□□□□ 0.03
RAB5B-203ENST00000546810 DTNBO60941 627 aa15.22■□□□□ 0.03
RAB5B-203ENST00000546810 KRT2P35908 639 aa15.22■□□□□ 0.03
RAB5B-203ENST00000546810 GNPTABQ3T906 1256 aa15.22■□□□□ 0.03
RAB5B-203ENST00000546810 KCNV1Q6PIU1 500 aa15.22■□□□□ 0.03
RAB5B-203ENST00000546810 RPAINQ86UA6 219 aa15.22■□□□□ 0.03
RAB5B-203ENST00000546810 MYOCDQ8IZQ8 938 aa15.22■□□□□ 0.03
RAB5B-203ENST00000546810 PBXIP1Q96AQ6 731 aa15.22■□□□□ 0.03
RAB5B-203ENST00000546810 TMEM260Q9NX78 707 aa15.22■□□□□ 0.03
RAB5B-203ENST00000546810 KCNJ14Q9UNX9 436 aa15.22■□□□□ 0.03
RAB5B-203ENST00000546810 TMEM221A6NGB7 291 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 RBAK-RBAKDNI3L0D1 243 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 M0R296 226 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 LGR5O75473 907 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 ARIH2O95376 493 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 HSP90AA1P07900 732 aaKnown RBP15.21■□□□□ 0.03
RAB5B-203ENST00000546810 MMP3P08254 477 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 GJB2P29033 226 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 LTBRP36941 435 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 SREBF1P36956 1147 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 CLUL1Q15846 466 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 TRAF7Q6Q0C0 670 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 KRT25Q7Z3Z0 450 aa15.21■□□□□ 0.03
RAB5B-203ENST00000546810 NLRX1Q86UT6 975 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms