RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TXKP42681 527 aa21.12■□□□□ 0.97
VPS33A-205ENST00000541169 PTGDRQ13258 359 aa21.12■□□□□ 0.97
VPS33A-205ENST00000541169 PDIA5Q14554 519 aa21.12■□□□□ 0.97
VPS33A-205ENST00000541169 EPHA7Q15375 998 aa21.12■□□□□ 0.97
VPS33A-205ENST00000541169 FAM47CQ5HY64 1035 aa21.12■□□□□ 0.97
VPS33A-205ENST00000541169 ATL3Q6DD88 541 aa21.12■□□□□ 0.97
VPS33A-205ENST00000541169 PDXDC2PQ6P474 469 aa21.12■□□□□ 0.97
VPS33A-205ENST00000541169 CCDC155Q8N6L0 562 aa21.12■□□□□ 0.97
VPS33A-205ENST00000541169 BBXQ8WY36 941 aaPredicted RBP21.12■□□□□ 0.97
VPS33A-205ENST00000541169 NOD1Q9Y239 953 aa21.12■□□□□ 0.97
VPS33A-205ENST00000541169 PCDHB6Q9Y5E3 794 aa21.12■□□□□ 0.97
VPS33A-205ENST00000541169 MYH9P35579 1960 aaKnown RBP21.12■□□□□ 0.97
VPS33A-205ENST00000541169 HBP1O60381 514 aa21.11■□□□□ 0.97
VPS33A-205ENST00000541169 P4HBP07237 508 aaKnown RBP21.11■□□□□ 0.97
VPS33A-205ENST00000541169 ZSCAN22P10073 491 aaPredicted RBP21.11■□□□□ 0.97
VPS33A-205ENST00000541169 HOXC8P31273 242 aa21.11■□□□□ 0.97
VPS33A-205ENST00000541169 FXR2P51116 673 aaKnown RBP eCLIP21.11■□□□□ 0.97
VPS33A-205ENST00000541169 PSMC5P62195 406 aa21.11■□□□□ 0.97
VPS33A-205ENST00000541169 RESTQ13127 1097 aa21.11■□□□□ 0.97
VPS33A-205ENST00000541169 FERMT3Q86UX7 667 aa21.11■□□□□ 0.97
VPS33A-205ENST00000541169 ERMNQ8TAM6 284 aa21.11■□□□□ 0.97
VPS33A-205ENST00000541169 ATP8B4Q8TF62 1192 aa21.11■□□□□ 0.97
VPS33A-205ENST00000541169 PCYT2Q99447 389 aa21.11■□□□□ 0.97
VPS33A-205ENST00000541169 NRBP2Q9NSY0 501 aa21.11■□□□□ 0.97
VPS33A-205ENST00000541169 HDAC6Q9UBN7 1215 aa21.11■□□□□ 0.97
VPS33A-205ENST00000541169 ATP6V1DQ9Y5K8 247 aa21.11■□□□□ 0.97
VPS33A-205ENST00000541169 COL1A2P08123 1366 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 IGSF9BQ9UPX0 1349 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 POTEB3A0JP26 581 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 C17orf102A2RUQ5 167 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 CHMP2AO43633 222 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 SMIM10L2AP0DMW4 78 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 SMIM10L2BP0DMW5 78 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 CHMP4BP1P59074 171 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 ATP2C1P98194 919 aaPredicted RBP21.1■□□□□ 0.97
VPS33A-205ENST00000541169 SPIRE1Q08AE8 756 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 PTGISQ16647 500 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 POTEBQ6S5H4 581 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 DTHD1Q6ZMT9 781 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 TRIM50Q86XT4 487 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 CCDC60Q8IWA6 550 aaPredicted RBP21.1■□□□□ 0.97
VPS33A-205ENST00000541169 C4orf32Q8N8J7 132 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 RNPEPQ9H4A4 650 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 GABBR1Q9UBS5 961 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 PPME1Q9Y570 386 aa21.1■□□□□ 0.97
VPS33A-205ENST00000541169 MORC2Q9Y6X9 1032 aaPredicted RBP21.1■□□□□ 0.97
VPS33A-205ENST00000541169 WNT7AO00755 349 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 KIAA0355O15063 1070 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 MUTP22033 750 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 QARSP47897 775 aaKnown RBP21.09■□□□□ 0.97
VPS33A-205ENST00000541169 FAAP100Q0VG06 881 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 ZNF484Q5JVG2 852 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 HAUS3Q68CZ6 603 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 CKAP2LQ8IYA6 745 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 EXOC8Q8IYI6 725 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 C7orf61Q8IZ16 206 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 SPRYD3Q8NCJ5 442 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 ZNF396Q96N95 335 aaPredicted RBP21.09■□□□□ 0.97
VPS33A-205ENST00000541169 UIMC1Q96RL1 719 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 TMEM60Q9H2L4 133 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 TMEM39AQ9NV64 488 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 TRPC6Q9Y210 931 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 ALPK3Q96L96 1907 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 KAT6AQ92794 2004 aa21.09■□□□□ 0.97
VPS33A-205ENST00000541169 B4GALT4O60513 344 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 CAND2O75155 1236 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 PPFIA1Q13136 1202 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 PTK7Q13308 1070 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 BFSP2Q13515 415 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 PLCB4Q15147 1175 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 XKR3Q5GH77 459 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 NCAPH2Q6IBW4 605 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 TAF2Q6P1X5 1199 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 KCTD17Q8N5Z5 321 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 CAGE1Q8TC20 777 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 GJA10Q969M2 543 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 ZSWIM4Q9H7M6 989 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 TELO2Q9Y4R8 837 aa21.08■□□□□ 0.97
VPS33A-205ENST00000541169 PITPNM1O00562 1244 aa21.07■□□□□ 0.96
VPS33A-205ENST00000541169 PARNO95453 639 aaKnown RBP21.07■□□□□ 0.96
VPS33A-205ENST00000541169 F13A1P00488 732 aa21.07■□□□□ 0.96
VPS33A-205ENST00000541169 TECP42680 631 aa21.07■□□□□ 0.96
VPS33A-205ENST00000541169 C4orf19Q8IY42 314 aa21.07■□□□□ 0.96
VPS33A-205ENST00000541169 ZNF710Q8N1W2 664 aa21.07■□□□□ 0.96
VPS33A-205ENST00000541169 PDLIM7Q9NR12 457 aa21.07■□□□□ 0.96
VPS33A-205ENST00000541169 TBX21Q9UL17 535 aa21.07■□□□□ 0.96
VPS33A-205ENST00000541169 WDR81Q562E7 1941 aa21.07■□□□□ 0.96
VPS33A-205ENST00000541169 SLC26A4O43511 780 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 LYPLA2O95372 231 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 OATP04181 439 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 XRCC6P12956 609 aaKnown RBP eCLIP21.06■□□□□ 0.96
VPS33A-205ENST00000541169 MARK3P27448 753 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 NUCB2P80303 420 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 NBR1Q14596 966 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 GRIK4Q16099 956 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 GDF6Q6KF10 455 aaPredicted RBP21.06■□□□□ 0.96
VPS33A-205ENST00000541169 OTUD6AQ7L8S5 288 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 RSPH3Q86UC2 560 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 SERINC5Q86VE9 423 aa21.06■□□□□ 0.96
VPS33A-205ENST00000541169 IGSF22Q8N9C0 903 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms