RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PLEKHG4Q58EX7 1191 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 PRAMEF18Q5VWM3 479 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 TMC5Q6UXY8 1006 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 UBE2R2Q712K3 238 aaPredicted RBP5.48□□□□□ -1.53
CD44-219ENST00000525685 RBM12BQ8IXT5 1001 aaKnown RBP5.48□□□□□ -1.53
CD44-219ENST00000525685 NIM1KQ8IY84 436 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 UHMK1Q8TAS1 419 aaKnown RBP5.48□□□□□ -1.53
CD44-219ENST00000525685 SLC7A14Q8TBB6 771 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 LCORQ96JN0 433 aaPredicted RBP5.48□□□□□ -1.53
CD44-219ENST00000525685 YTHDC1Q96MU7 727 aaKnown RBP5.48□□□□□ -1.53
CD44-219ENST00000525685 RBM15Q96T37 977 aaKnown RBP eCLIP5.48□□□□□ -1.53
CD44-219ENST00000525685 RBPJLQ9UBG7 517 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 PLAAQ9Y263 795 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.47□□□□□ -1.53
CD44-219ENST00000525685 B4E1Z4 1266 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 K7ESM1 405 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 NKRFO15226 690 aaKnown RBP eCLIP5.47□□□□□ -1.53
CD44-219ENST00000525685 RASGRP1O95267 797 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 GRIN1Q05586 938 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 SPIRE1Q08AE8 756 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 TUSC3Q13454 348 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 RNF187Q5TA31 235 aaPredicted RBP5.47□□□□□ -1.53
CD44-219ENST00000525685 FAM124AQ86V42 546 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 LGI4Q8N135 537 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 ZCCHC14Q8WYQ9 949 aaKnown RBP5.47□□□□□ -1.53
CD44-219ENST00000525685 NINJ1Q92982 152 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 FBXW5Q969U6 566 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 MBD6Q96DN6 1003 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 CLUHP3Q96NS8 147 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 WRNIP1Q96S55 665 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 IPPKQ9H8X2 491 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 MAGEC2Q9UBF1 373 aaPredicted RBP5.47□□□□□ -1.53
CD44-219ENST00000525685 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.47□□□□□ -1.53
CD44-219ENST00000525685 INVSQ9Y283 1065 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 TELO2Q9Y4R8 837 aa5.47□□□□□ -1.53
CD44-219ENST00000525685 CADPSQ9ULU8 1353 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 RFPL3O75679 317 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 CYP7B1O75881 506 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 PLATP00750 562 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 LTFP02788 710 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 ASLP04424 464 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 IGFALSP35858 605 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 CRY1Q16526 586 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 TBC1D10BQ4KMP7 808 aaPredicted RBP5.46□□□□□ -1.54
CD44-219ENST00000525685 PAN2Q504Q3 1202 aaKnown RBP5.46□□□□□ -1.54
CD44-219ENST00000525685 TRIM61Q5EBN2 209 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 BORAQ6PGQ7 559 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 HHIPL2Q6UWX4 724 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 KIAA0907Q7Z7F0 614 aaPredicted RBP5.46□□□□□ -1.54
CD44-219ENST00000525685 DDX53Q86TM3 631 aaKnown RBP5.46□□□□□ -1.54
CD44-219ENST00000525685 FAM177A1Q8N128 213 aaPredicted RBP5.46□□□□□ -1.54
CD44-219ENST00000525685 DTX3Q8N9I9 347 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 L2HGDHQ9H9P8 463 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 CROTQ9UKG9 612 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 NUB1Q9Y5A7 615 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 KIF21AQ7Z4S6 1674 aa5.46□□□□□ -1.54
CD44-219ENST00000525685 CCDC88BA6NC98 1476 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 B4GALT3O60512 393 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 CYP1A1P04798 512 aaPredicted RBP5.45□□□□□ -1.54
CD44-219ENST00000525685 COL6A1P12109 1028 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 MYCLP1P12525 358 aaPredicted RBP5.45□□□□□ -1.54
CD44-219ENST00000525685 FAHP16930 419 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 KRT15P19012 456 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 EPHA5P54756 1037 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 CFAP100Q494V2 611 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 CT47A1Q5JQC4 288 aaPredicted RBP5.45□□□□□ -1.54
CD44-219ENST00000525685 EGFLAMQ63HQ2 1017 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 VASNQ6EMK4 673 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 FGD2Q7Z6J4 655 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.45□□□□□ -1.54
CD44-219ENST00000525685 GSTCDQ8NEC7 633 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 MFSD3Q96ES6 412 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 TMEM168Q9H0V1 697 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 DLL4Q9NR61 685 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 DSEQ9UL01 958 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 TNPO3Q9Y5L0 923 aaKnown RBP5.45□□□□□ -1.54
CD44-219ENST00000525685 PRDM2Q13029 1718 aa5.45□□□□□ -1.54
CD44-219ENST00000525685 TCRBV16S1A1N1A0A5B0 115 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 CCDC66A2RUB6 948 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 WNT9AO14904 365 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 JMJD7P0C870 316 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 PYGMP11217 842 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 SDSP20132 328 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 CNGA1P29973 690 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 DALRD3Q5D0E6 543 aaKnown RBP5.44□□□□□ -1.54
CD44-219ENST00000525685 PKN3Q6P5Z2 889 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 DBX2Q6ZNG2 339 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 KCTD1Q719H9 257 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 IGSF22Q8N9C0 903 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 THOC2Q8NI27 1593 aaKnown RBP5.44□□□□□ -1.54
CD44-219ENST00000525685 PCDH19Q8TAB3 1148 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 SH3RF2Q8TEC5 729 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 SCLYQ96I15 445 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 WNK4Q96J92 1243 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 SSBP3Q9BWW4 388 aaPredicted RBP5.44□□□□□ -1.54
CD44-219ENST00000525685 TRIM39Q9HCM9 518 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 SAMD15Q9P1V8 674 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 COQ6Q9Y2Z9 468 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 CFTRP13569 1480 aa5.44□□□□□ -1.54
CD44-219ENST00000525685 ERCC6Q03468 1493 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms