RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 CACNB3P54284 484 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 MTMR3Q13615 1198 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 C10orf76Q5T2E6 689 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 TEX2Q8IWB9 1127 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 BANK1Q8NDB2 785 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 PBKQ96KB5 322 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 MMTAG2Q9BU76 263 aaKnown RBP12.54□□□□□ -0.4
CTNND2-215ENST00000513588 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 RIOX1Q9H6W3 641 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 SIK3Q9Y2K2 1263 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 CAPN7Q9Y6W3 813 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 BAZ2AQ9UIF9 1905 aaKnown RBP12.54□□□□□ -0.4
CTNND2-215ENST00000513588 SFI1A8K8P3 1242 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 ACTN1P12814 892 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 AARSP49588 968 aaKnown RBP eCLIP12.54□□□□□ -0.4
CTNND2-215ENST00000513588 ARHGAP4P98171 946 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 BARGINQ6ZT62 677 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 KCNK18Q7Z418 384 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 GLIS3Q8NEA6 775 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 RUBCNQ92622 972 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 CCDC114Q96M63 670 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 CTTNBP2NLQ9P2B4 639 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 A0A087X0T9 212 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 PPEF1O14829 653 aaPredicted RBP12.54□□□□□ -0.4
CTNND2-215ENST00000513588 SYF2O95926 243 aaKnown RBP12.54□□□□□ -0.4
CTNND2-215ENST00000513588 FOSP01100 380 aaPredicted RBP12.54□□□□□ -0.4
CTNND2-215ENST00000513588 FAM228BP0C875 321 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 ZNF662Q6ZS27 426 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 TADA2BQ86TJ2 420 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 FAM186BQ8IYM0 893 aa12.54□□□□□ -0.4
CTNND2-215ENST00000513588 DHX36Q9H2U1 1008 aaKnown RBP12.54□□□□□ -0.4
CTNND2-215ENST00000513588 ADAMTSL3P82987 1691 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 MYH6P13533 1939 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 FERP16591 822 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 KNOP1Q1ED39 458 aaKnown RBP12.53□□□□□ -0.4
CTNND2-215ENST00000513588 PPP4R3AQ6IN85 833 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 FMNL3Q8IVF7 1028 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 FAM178BQ8IXR5 827 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 SPICE1Q8N0Z3 855 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 CABS1Q96KC9 395 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 PLAAQ9Y263 795 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 ARHGEF35A5YM69 484 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 HOXA13P31271 388 aaPredicted RBP12.53□□□□□ -0.4
CTNND2-215ENST00000513588 SSR1P43307 286 aaKnown RBP12.53□□□□□ -0.4
CTNND2-215ENST00000513588 RBM26Q5T8P6 1007 aaKnown RBP12.53□□□□□ -0.4
CTNND2-215ENST00000513588 MCTP2Q6DN12 878 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 TBC1D16Q8TBP0 767 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 ZIM3Q96PE6 472 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 UBAP1LF5GYI3 381 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 ZNF263O14978 683 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 GAS7O60861 476 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 GDF11O95390 407 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 NAB2Q15742 525 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 CCDC25Q86WR0 208 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 TLR10Q9BXR5 811 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 TTYH3Q9C0H2 523 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 COA1Q9GZY4 146 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 DDX47Q9H0S4 455 aaKnown RBP12.53□□□□□ -0.4
CTNND2-215ENST00000513588 GOLPH3Q9H4A6 298 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 LRP6O75581 1613 aa12.53□□□□□ -0.4
CTNND2-215ENST00000513588 GRID2IPA4D2P6 1211 aa12.52□□□□□ -0.4
CTNND2-215ENST00000513588 DDX39AO00148 427 aaKnown RBP12.52□□□□□ -0.4
CTNND2-215ENST00000513588 NR3C1P04150 777 aa12.52□□□□□ -0.4
CTNND2-215ENST00000513588 SLC9A1P19634 815 aa12.52□□□□□ -0.4
CTNND2-215ENST00000513588 MTMR9Q96QG7 549 aa12.52□□□□□ -0.4
CTNND2-215ENST00000513588 RAB17Q9H0T7 212 aa12.52□□□□□ -0.4
CTNND2-215ENST00000513588 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.4
CTNND2-215ENST00000513588 ZYXQ15942 572 aaKnown RBP12.52□□□□□ -0.41
CTNND2-215ENST00000513588 ARL8AQ96BM9 186 aa12.52□□□□□ -0.41
CTNND2-215ENST00000513588 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.41
CTNND2-215ENST00000513588 MTRF1LQ9UGC7 380 aaKnown RBP12.52□□□□□ -0.41
CTNND2-215ENST00000513588 MYO5AQ9Y4I1 1855 aaKnown RBP12.52□□□□□ -0.41
CTNND2-215ENST00000513588 MYH8P13535 1937 aa12.52□□□□□ -0.41
CTNND2-215ENST00000513588 EIF3HO15372 352 aaKnown RBP eCLIP12.52□□□□□ -0.41
CTNND2-215ENST00000513588 PSMC2P35998 433 aaKnown RBP12.52□□□□□ -0.41
CTNND2-215ENST00000513588 KLHDC7AQ5VTJ3 777 aa12.52□□□□□ -0.41
CTNND2-215ENST00000513588 PIGOQ8TEQ8 1089 aa12.52□□□□□ -0.41
CTNND2-215ENST00000513588 EEF2P13639 858 aaKnown RBP12.51□□□□□ -0.41
CTNND2-215ENST00000513588 UCHL3P15374 230 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 USP11P51784 963 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 ABCB5Q2M3G0 1257 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 ODR4Q5SWX8 454 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 CCDC174Q6PII3 467 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 AENQ8WTP8 325 aaKnown RBP12.51□□□□□ -0.41
CTNND2-215ENST00000513588 SYN2Q92777 582 aaPredicted RBP12.51□□□□□ -0.41
CTNND2-215ENST00000513588 TAF1DQ9H5J8 278 aaPredicted RBP12.51□□□□□ -0.41
CTNND2-215ENST00000513588 HMGB1P1B2RPK0 211 aaPredicted RBP12.51□□□□□ -0.41
CTNND2-215ENST00000513588 SPOPO43791 374 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 KIF4AO95239 1232 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 BCRP11274 1271 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 UBXN2AP68543 259 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 PTK2Q05397 1052 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 ITIH3Q06033 890 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 SF3A3Q12874 501 aaKnown RBP eCLIP12.51□□□□□ -0.41
CTNND2-215ENST00000513588 IFT88Q13099 833 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 AP3B2Q13367 1082 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 CUL1Q13616 776 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms