RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 SMIM10L2AP0DMW4 78 aa17.6■□□□□ 0.41
SH3TC1-220ENST00000511002 SMIM10L2BP0DMW5 78 aa17.6■□□□□ 0.41
SH3TC1-220ENST00000511002 TCF7P36402 384 aaPredicted RBP17.6■□□□□ 0.41
SH3TC1-220ENST00000511002 SMAD3P84022 425 aaKnown RBP17.6■□□□□ 0.41
SH3TC1-220ENST00000511002 TRAF7Q6Q0C0 670 aa17.6■□□□□ 0.41
SH3TC1-220ENST00000511002 HERVK_113Q902F9 699 aa17.6■□□□□ 0.41
SH3TC1-220ENST00000511002 MBOAT7Q96N66 472 aa17.6■□□□□ 0.41
SH3TC1-220ENST00000511002 PCYT2Q99447 389 aa17.6■□□□□ 0.41
SH3TC1-220ENST00000511002 RBM19Q9Y4C8 960 aaKnown RBP17.6■□□□□ 0.41
SH3TC1-220ENST00000511002 CYP3A7-CYP3A51PA0A087WV96 503 aa17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 CCNT1O60563 726 aaKnown RBP17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 ATP2B1P20020 1258 aa17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 CYP3A7P24462 503 aa17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 HOXC8P31273 242 aa17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 PBX2P40425 430 aa17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 SETQ01105 290 aaPredicted RBP17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 ITGB3BPQ13352 177 aaPredicted RBP17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 PKP1Q13835 747 aa17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 TCTN1Q2MV58 587 aa17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 MOXD1Q6UVY6 613 aa17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 CDHR1Q96JP9 859 aa17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 TTYH1Q9H313 450 aaPredicted RBP17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 RNPEPQ9H4A4 650 aa17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 AGO4Q9HCK5 861 aaKnown RBP17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 DDX25Q9UHL0 483 aaKnown RBP17.59■□□□□ 0.41
SH3TC1-220ENST00000511002 TREHO43280 583 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 CKBP12277 381 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 RBL2Q08999 1139 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 RESTQ13127 1097 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 BFSP2Q13515 415 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 NBR1Q14596 966 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 Q4G0T1 1027 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 PPP4R3AQ6IN85 833 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 RETREG2Q8NC44 543 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 GIMAP8Q8ND71 665 aaPredicted RBP17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 GUCD1Q96NT3 240 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 SETD4Q9NVD3 440 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 KAT6AQ92794 2004 aa17.58■□□□□ 0.4
SH3TC1-220ENST00000511002 PTPRSQ13332 1948 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 C17orf102A2RUQ5 167 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 DDX39AO00148 427 aaKnown RBP17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 MSH4O15457 936 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 GCFC2P16383 781 aaKnown RBP17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 MARK3P27448 753 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 TOB1P50616 345 aaPredicted RBP17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 PTK7Q13308 1070 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 MBTPS1Q14703 1052 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 TTC38Q5R3I4 469 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 ZNF618Q5T7W0 954 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 FOXD4L5Q5VV16 416 aaPredicted RBP17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 LRRC8DQ7L1W4 858 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 CAGE1Q8TC20 777 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 AFAP1L1Q8TED9 768 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 FOXD4L4Q8WXT5 416 aaPredicted RBP17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 SEPT1Q8WYJ6 367 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 GJA10Q969M2 543 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 NAP1L4Q99733 375 aaKnown RBP17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 OSBPL7Q9BZF2 842 aa17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 JPH1Q9HDC5 661 aaPredicted RBP17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 NOL7Q9UMY1 257 aaKnown RBP17.57■□□□□ 0.4
SH3TC1-220ENST00000511002 NFASCO94856 1347 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 IPO5O00410 1097 aaKnown RBP17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 MAFGO15525 162 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 NBNO60934 754 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 CCNE2O96020 404 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 SELPP16109 830 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 DNAJB2P25686 324 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 ADAM17P78536 824 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 ZNF697Q5TEC3 545 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 SERINC5Q86VE9 423 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 RPUSD2Q8IZ73 545 aaKnown RBP17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 ETNPPLQ8TBG4 499 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 LMBR1Q8WVP7 490 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 ATP6V0A1Q93050 837 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 ZNF577Q9BSK1 485 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 PBX4Q9BYU1 374 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 SLC9A2Q9UBY0 812 aa17.56■□□□□ 0.4
SH3TC1-220ENST00000511002 WDR81Q562E7 1941 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 ZBBXA8MT70 800 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 DHX15O43143 795 aaKnown RBP17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 LGR5O75473 907 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 MCM7P33993 719 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 TRAPPC10P48553 1259 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 ACTR2P61160 394 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 ZNF174Q15697 407 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 FAM173BQ6P4H8 233 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 BRAPQ7Z569 592 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 SLC5A5Q92911 643 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 ZBTB10Q96DT7 871 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 SDF4Q9BRK5 362 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 SEMA6BQ9H3T3 888 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 KCNMB3Q9NPA1 279 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 ZNF215Q9UL58 517 aaPredicted RBP17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 PCDHB6Q9Y5E3 794 aa17.55■□□□□ 0.4
SH3TC1-220ENST00000511002 NEMFO60524 1076 aa17.54■□□□□ 0.4
SH3TC1-220ENST00000511002 PFKMP08237 780 aa17.54■□□□□ 0.4
SH3TC1-220ENST00000511002 ZSCAN22P10073 491 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms