RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 PTPRSQ13332 1948 aa19.12■□□□□ 0.65
SYNE4-207ENST00000505054 TDP2O95551 362 aa19.12■□□□□ 0.65
SYNE4-207ENST00000505054 MYOGP15173 224 aa19.12■□□□□ 0.65
SYNE4-207ENST00000505054 RFC2P35250 354 aa19.12■□□□□ 0.65
SYNE4-207ENST00000505054 SETQ01105 290 aaPredicted RBP19.12■□□□□ 0.65
SYNE4-207ENST00000505054 PRR16Q569H4 304 aa19.12■□□□□ 0.65
SYNE4-207ENST00000505054 MBOAT7Q96N66 472 aa19.12■□□□□ 0.65
SYNE4-207ENST00000505054 KIF3AQ9Y496 699 aa19.12■□□□□ 0.65
SYNE4-207ENST00000505054 CYP3A7-CYP3A51PA0A087WV96 503 aa19.11■□□□□ 0.65
SYNE4-207ENST00000505054 ACTN1P12814 892 aa19.11■□□□□ 0.65
SYNE4-207ENST00000505054 CYP3A7P24462 503 aa19.11■□□□□ 0.65
SYNE4-207ENST00000505054 SAFBQ15424 915 aaKnown RBP eCLIP19.11■□□□□ 0.65
SYNE4-207ENST00000505054 FAM47CQ5HY64 1035 aa19.11■□□□□ 0.65
SYNE4-207ENST00000505054 DEFB128Q7Z7B8 93 aa19.11■□□□□ 0.65
SYNE4-207ENST00000505054 NEK8Q86SG6 692 aa19.11■□□□□ 0.65
SYNE4-207ENST00000505054 MICALL1Q8N3F8 863 aa19.11■□□□□ 0.65
SYNE4-207ENST00000505054 GIMAP8Q8ND71 665 aaPredicted RBP19.11■□□□□ 0.65
SYNE4-207ENST00000505054 UIMC1Q96RL1 719 aa19.11■□□□□ 0.65
SYNE4-207ENST00000505054 SLC9A7Q96T83 725 aa19.11■□□□□ 0.65
SYNE4-207ENST00000505054 GPR20Q99678 358 aa19.11■□□□□ 0.65
SYNE4-207ENST00000505054 TRIP12Q14669 1992 aaPredicted RBP19.1■□□□□ 0.65
SYNE4-207ENST00000505054 NFASCO94856 1347 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 KIF28PB7ZC32 967 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 PITPNM1O00562 1244 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 KPNA6O60684 536 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 ZNF286BP0CG31 522 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 SP4Q02446 784 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 PTPN11Q06124 597 aaPredicted RBP19.1■□□□□ 0.65
SYNE4-207ENST00000505054 DGKDQ16760 1214 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 LETM2Q2VYF4 491 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 Q4G0T1 1027 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 NFRKBQ6P4R8 1299 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 MOXD1Q6UVY6 613 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 HSCBQ8IWL3 235 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 KAT2BQ92831 832 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 PRRC2BQ5JSZ5 2229 aaKnown RBP19.1■□□□□ 0.65
SYNE4-207ENST00000505054 TET1Q8NFU7 2136 aa19.1■□□□□ 0.65
SYNE4-207ENST00000505054 DOCK5Q9H7D0 1870 aa19.09■□□□□ 0.65
SYNE4-207ENST00000505054 XIRP2A4UGR9 3374 aa19.09■□□□□ 0.65
SYNE4-207ENST00000505054 IPO5O00410 1097 aaKnown RBP19.09■□□□□ 0.65
SYNE4-207ENST00000505054 NOP56O00567 594 aaKnown RBP19.09■□□□□ 0.65
SYNE4-207ENST00000505054 MSH4O15457 936 aa19.09■□□□□ 0.65
SYNE4-207ENST00000505054 DHX15O43143 795 aaKnown RBP19.09■□□□□ 0.65
SYNE4-207ENST00000505054 SLC37A4O43826 429 aa19.09■□□□□ 0.65
SYNE4-207ENST00000505054 CA3P07451 260 aa19.09■□□□□ 0.65
SYNE4-207ENST00000505054 AAK1Q2M2I8 961 aa19.09■□□□□ 0.65
SYNE4-207ENST00000505054 NBPF20Q3BBV1 942 aa19.09■□□□□ 0.65
SYNE4-207ENST00000505054 INTS4Q96HW7 963 aaKnown RBP19.09■□□□□ 0.65
SYNE4-207ENST00000505054 ZNF577Q9BSK1 485 aa19.09■□□□□ 0.65
SYNE4-207ENST00000505054 FOXP1Q9H334 677 aaPredicted RBP19.09■□□□□ 0.65
SYNE4-207ENST00000505054 JPH1Q9HDC5 661 aaPredicted RBP19.09■□□□□ 0.65
SYNE4-207ENST00000505054 BDP1A6H8Y1 2624 aa19.09■□□□□ 0.65
SYNE4-207ENST00000505054 WNT7AO00755 349 aa19.08■□□□□ 0.64
SYNE4-207ENST00000505054 GTPBP6O43824 516 aaPredicted RBP19.08■□□□□ 0.64
SYNE4-207ENST00000505054 PPFIA4O75335 1185 aa19.08■□□□□ 0.64
SYNE4-207ENST00000505054 F2P00734 622 aa19.08■□□□□ 0.64
SYNE4-207ENST00000505054 POU3F3P20264 500 aaPredicted RBP19.08■□□□□ 0.64
SYNE4-207ENST00000505054 PPP4R3AQ6IN85 833 aa19.08■□□□□ 0.64
SYNE4-207ENST00000505054 PHOSPHO2Q8TCD6 241 aa19.08■□□□□ 0.64
SYNE4-207ENST00000505054 SDF4Q9BRK5 362 aa19.08■□□□□ 0.64
SYNE4-207ENST00000505054 FOXD4L1Q9NU39 408 aa19.08■□□□□ 0.64
SYNE4-207ENST00000505054 SLC9A2Q9UBY0 812 aa19.08■□□□□ 0.64
SYNE4-207ENST00000505054 DDX25Q9UHL0 483 aaKnown RBP19.08■□□□□ 0.64
SYNE4-207ENST00000505054 GSTTP1A0A1W2PQM5 241 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 DDX39AO00148 427 aaKnown RBP19.07■□□□□ 0.64
SYNE4-207ENST00000505054 CCNE2O96020 404 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 LGALS2P05162 132 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 GCFC2P16383 781 aaKnown RBP19.07■□□□□ 0.64
SYNE4-207ENST00000505054 U2AF2P26368 475 aaKnown RBP eCLIP19.07■□□□□ 0.64
SYNE4-207ENST00000505054 BFSP2Q13515 415 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 TRIM50Q86XT4 487 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 NOSTRINQ8IVI9 506 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 RETREG2Q8NC44 543 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 ETNPPLQ8TBG4 499 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 PPP1R13LQ8WUF5 828 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 SLC5A5Q92911 643 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 GJA10Q969M2 543 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 C16orf70Q9BSU1 422 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 MTCH2Q9Y6C9 303 aa19.07■□□□□ 0.64
SYNE4-207ENST00000505054 CCNT1O60563 726 aaKnown RBP19.06■□□□□ 0.64
SYNE4-207ENST00000505054 BAIAP3O94812 1187 aa19.06■□□□□ 0.64
SYNE4-207ENST00000505054 IQCF3P0C7M6 154 aa19.06■□□□□ 0.64
SYNE4-207ENST00000505054 TCF7P36402 384 aaPredicted RBP19.06■□□□□ 0.64
SYNE4-207ENST00000505054 SKIV2LQ15477 1246 aaKnown RBP19.06■□□□□ 0.64
SYNE4-207ENST00000505054 LARP1BQ659C4 914 aaKnown RBP19.06■□□□□ 0.64
SYNE4-207ENST00000505054 CCDC155Q8N6L0 562 aa19.06■□□□□ 0.64
SYNE4-207ENST00000505054 TBC1D22BQ9NU19 505 aa19.06■□□□□ 0.64
SYNE4-207ENST00000505054 NOD1Q9Y239 953 aa19.06■□□□□ 0.64
SYNE4-207ENST00000505054 HAS3O00219 553 aa19.05■□□□□ 0.64
SYNE4-207ENST00000505054 BMP1P13497 986 aa19.05■□□□□ 0.64
SYNE4-207ENST00000505054 PSEN2P49810 448 aa19.05■□□□□ 0.64
SYNE4-207ENST00000505054 ACTR2P61160 394 aa19.05■□□□□ 0.64
SYNE4-207ENST00000505054 TFF2Q03403 129 aa19.05■□□□□ 0.64
SYNE4-207ENST00000505054 GNL2Q13823 731 aaKnown RBP19.05■□□□□ 0.64
SYNE4-207ENST00000505054 UTP14CQ5TAP6 766 aaKnown RBP19.05■□□□□ 0.64
SYNE4-207ENST00000505054 POTEDQ86YR6 584 aa19.05■□□□□ 0.64
SYNE4-207ENST00000505054 SEPT1Q8WYJ6 367 aa19.05■□□□□ 0.64
SYNE4-207ENST00000505054 NAP1L4Q99733 375 aaKnown RBP19.05■□□□□ 0.64
SYNE4-207ENST00000505054 FTOQ9C0B1 505 aaKnown RBP eCLIP19.05■□□□□ 0.64
SYNE4-207ENST00000505054 KCNMB3Q9NPA1 279 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms