RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 ARHGEF16Q5VV41 709 aa8.77□□□□□ -1.01
RBM39-238ENST00000493853 TMEM214Q6NUQ4 689 aaKnown RBP8.77□□□□□ -1.01
RBM39-238ENST00000493853 SEPT14Q6ZU15 432 aa8.77□□□□□ -1.01
RBM39-238ENST00000493853 RALYLQ86SE5 291 aaKnown RBP8.77□□□□□ -1.01
RBM39-238ENST00000493853 ENAHQ8N8S7 591 aaPredicted RBP8.77□□□□□ -1.01
RBM39-238ENST00000493853 MAFAQ8NHW3 353 aaPredicted RBP8.77□□□□□ -1.01
RBM39-238ENST00000493853 ANKS1AQ92625 1134 aa8.77□□□□□ -1.01
RBM39-238ENST00000493853 MTG1Q9BT17 334 aaPredicted RBP8.77□□□□□ -1.01
RBM39-238ENST00000493853 MAF1Q9H063 256 aa8.77□□□□□ -1.01
RBM39-238ENST00000493853 MSRAQ9UJ68 235 aa8.77□□□□□ -1.01
RBM39-238ENST00000493853 NOD1Q9Y239 953 aa8.77□□□□□ -1.01
RBM39-238ENST00000493853 TNKSO95271 1327 aa8.77□□□□□ -1.01
RBM39-238ENST00000493853 COL11A1P12107 1806 aaPredicted RBP8.76□□□□□ -1.01
RBM39-238ENST00000493853 RBM47A0AV96 593 aaKnown RBP8.76□□□□□ -1.01
RBM39-238ENST00000493853 KLRF2D3W0D1 207 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 PIK3CDO00329 1044 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 IFIT3O14879 490 aaKnown RBP8.76□□□□□ -1.01
RBM39-238ENST00000493853 B4GALT4O60513 344 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 CFBP00751 764 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 SKIP12755 728 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 PHKA2P46019 1235 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 PURAQ00577 322 aaKnown RBP8.76□□□□□ -1.01
RBM39-238ENST00000493853 TRAF1Q13077 416 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 SART3Q15020 963 aaKnown RBP8.76□□□□□ -1.01
RBM39-238ENST00000493853 QRICH1Q2TAL8 776 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 WDR44Q5JSH3 913 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 RNFT1Q5M7Z0 435 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 TTC22Q5TAA0 569 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 C16orf59Q7L2K0 433 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 CHST3Q7LGC8 479 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 OTOP2Q7RTS6 562 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.76□□□□□ -1.01
RBM39-238ENST00000493853 RETREG2Q8NC44 543 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 TIFAQ96CG3 184 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 TAAR1Q96RJ0 339 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 IWS1Q96ST2 819 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 RMDN3Q96TC7 470 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 AMNQ9BXJ7 453 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 ALDH8A1Q9H2A2 487 aaPredicted RBP8.76□□□□□ -1.01
RBM39-238ENST00000493853 TTYH1Q9H313 450 aaPredicted RBP8.76□□□□□ -1.01
RBM39-238ENST00000493853 ALG2Q9H553 416 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 ZNF576Q9H609 170 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 JMJD4Q9H9V9 463 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 ETNK1Q9HBU6 452 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 GRIN2DO15399 1336 aa8.76□□□□□ -1.01
RBM39-238ENST00000493853 GH1P01241 217 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 CYP2C9P11712 490 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 EDNRBP24530 442 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 IRX6P78412 446 aaPredicted RBP8.75□□□□□ -1.01
RBM39-238ENST00000493853 RAB30Q15771 203 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 FOXR1Q6PIV2 292 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 TRIM22Q8IYM9 498 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 SYTL5Q8TDW5 730 aaPredicted RBP8.75□□□□□ -1.01
RBM39-238ENST00000493853 HERVK_113Q902F9 699 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 TBC1D5Q92609 795 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 COPS5Q92905 334 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 NOC4LQ9BVI4 516 aaKnown RBP8.75□□□□□ -1.01
RBM39-238ENST00000493853 SLC28A3Q9HAS3 691 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 TRMT13Q9NUP7 481 aaKnown RBP8.75□□□□□ -1.01
RBM39-238ENST00000493853 PCDHA1Q9Y5I3 950 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 HRH3Q9Y5N1 445 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 SLC4A7Q9Y6M7 1214 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 LAMA3Q16787 3333 aa8.75□□□□□ -1.01
RBM39-238ENST00000493853 ZNFX1Q9P2E3 1918 aaKnown RBP8.74□□□□□ -1.01
RBM39-238ENST00000493853 MYH4Q9Y623 1939 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 A6NJR5 290 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 GRXCR1A8MXD5 290 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 ZBTB5O15062 677 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 MYCLP12524 364 aaPredicted RBP8.74□□□□□ -1.01
RBM39-238ENST00000493853 ACTN1P12814 892 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 EIF2AK2P19525 551 aaKnown RBP8.74□□□□□ -1.01
RBM39-238ENST00000493853 CASTP20810 708 aaKnown RBP8.74□□□□□ -1.01
RBM39-238ENST00000493853 CHMLP26374 656 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 GDF10P55107 478 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 BFSP2Q13515 415 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 GRIN2CQ14957 1233 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 WTAPQ15007 396 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 TLR1Q15399 786 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 DBN1Q16643 649 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 LY6KQ17RY6 165 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 EML3Q32P44 896 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 NFRKBQ6P4R8 1299 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 DEFB128Q7Z7B8 93 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 HOMER1Q86YM7 354 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 STAG2Q8N3U4 1231 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 NCOA7Q8NI08 942 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 ZNF837Q96EG3 531 aaPredicted RBP8.74□□□□□ -1.01
RBM39-238ENST00000493853 SCLYQ96I15 445 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 PBX4Q9BYU1 374 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 FTOQ9C0B1 505 aaKnown RBP eCLIP8.74□□□□□ -1.01
RBM39-238ENST00000493853 MAP3K20Q9NYL2 800 aaKnown RBP8.74□□□□□ -1.01
RBM39-238ENST00000493853 MRVI1Q9Y6F6 885 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 PARP14Q460N5 1801 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 FRMPD3Q5JV73 1810 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 SMCHD1A6NHR9 2005 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 UMODL1Q5DID0 1318 aa8.74□□□□□ -1.01
RBM39-238ENST00000493853 POM121CA8CG34 1229 aa8.73□□□□□ -1.01
RBM39-238ENST00000493853 GCOM1H8Y6P7 765 aaPredicted RBP8.73□□□□□ -1.01
RBM39-238ENST00000493853 EIF3JO75822 258 aaKnown RBP8.73□□□□□ -1.01
RBM39-238ENST00000493853 F11P03951 625 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms