RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SH3D21A4FU49 640 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 PRAMEF25A6NGN4 478 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 H7C1D1 291 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 MAN2B1O00754 1011 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 GAS7O60861 476 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 LRG1P02750 347 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 CKMP06732 381 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 JMJD7P0C870 316 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 THBS2P35442 1172 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 NEK4P51957 841 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 ITGA1P56199 1179 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 JAM2P57087 298 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 OCRLQ01968 901 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 CLEC4DQ8WXI8 215 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 CLUHP3Q96NS8 147 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 GORASP1Q9BQQ3 440 aa6.19□□□□□ -1.42
ITGB1-214ENST00000488427 M0R2C6 588 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 POU3F2P20265 443 aaPredicted RBP6.18□□□□□ -1.42
ITGB1-214ENST00000488427 RPL13P26373 211 aaKnown RBP6.18□□□□□ -1.42
ITGB1-214ENST00000488427 SARSP49591 514 aaKnown RBP6.18□□□□□ -1.42
ITGB1-214ENST00000488427 IRF9Q00978 393 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 PIK3R6Q5UE93 754 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 PRAMEF18Q5VWM3 479 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 GIMAP6Q6P9H5 292 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 OVCH1Q7RTY7 1134 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 LRRTM3Q86VH5 581 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 NME9Q86XW9 330 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 PASD1Q8IV76 773 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 FAM26EQ8N5C1 309 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 IGDCC4Q8TDY8 1250 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 RELTQ969Z4 430 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 ORAI3Q9BRQ5 295 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 L2HGDHQ9H9P8 463 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 SMURF1Q9HCE7 757 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 LUC7LQ9NQ29 371 aaKnown RBP6.18□□□□□ -1.42
ITGB1-214ENST00000488427 ACSS2Q9NR19 701 aa6.18□□□□□ -1.42
ITGB1-214ENST00000488427 MAFGO15525 162 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 AMY2AP04746 511 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 AMY2BP19961 511 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 SKIDA1Q1XH10 827 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 ERICH6BQ5W0A0 696 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 CD276Q5ZPR3 534 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 CDCA2Q69YH5 1023 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-214ENST00000488427 PKN3Q6P5Z2 889 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 LIPIQ6XZB0 460 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 OTOP1Q7RTM1 612 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 CALML6Q8TD86 181 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 C20orf173Q96LM9 149 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 EPB41L4AQ9HCS5 686 aaPredicted RBP6.17□□□□□ -1.42
ITGB1-214ENST00000488427 PARD6AQ9NPB6 346 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 IFT57Q9NWB7 429 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 ARHGAP20Q9P2F6 1191 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 FTSJ1Q9UET6 329 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 PLA2G2DQ9UNK4 145 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 MAPRE3Q9UPY8 281 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 PRKAB1Q9Y478 270 aa6.17□□□□□ -1.42
ITGB1-214ENST00000488427 ARAP1Q96P48 1450 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 LAMC3Q9Y6N6 1575 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 ZNF839A8K0R7 811 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 CBX4O00257 560 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 SCDO00767 359 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 LTFP02788 710 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
ITGB1-214ENST00000488427 CYP17A1P05093 508 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 KCNC1P48547 511 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 SCNN1BP51168 640 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 GJA9P57773 515 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 KIAA2012Q0VF49 1180 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 DBPQ10586 325 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-214ENST00000488427 SMAD4Q13485 552 aaKnown RBP6.16□□□□□ -1.42
ITGB1-214ENST00000488427 TKFCQ3LXA3 575 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 DALRD3Q5D0E6 543 aaKnown RBP6.16□□□□□ -1.42
ITGB1-214ENST00000488427 FAM26FQ5R3K3 315 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 CNNM4Q6P4Q7 775 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 TMC5Q6UXY8 1006 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 C11orf74Q86VG3 221 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 CARFQ8N187 725 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 DTX3Q8N9I9 347 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 OR2W6PQ8NHA6 318 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 SH3RF2Q8TEC5 729 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 DDX1Q92499 740 aaKnown RBP6.16□□□□□ -1.42
ITGB1-214ENST00000488427 ZCCHC4Q9H5U6 513 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.16□□□□□ -1.42
ITGB1-214ENST00000488427 B4GALT6Q9UBX8 382 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 FBXO10Q9UK96 956 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 CROTQ9UKG9 612 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 ASB1Q9Y576 335 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 B3GALT1Q9Y5Z6 326 aa6.16□□□□□ -1.42
ITGB1-214ENST00000488427 TCRBV5S4A2TA0A5A2 114 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 PTPDC1A2A3K4 754 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 C9orf118A6NHY6 69 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 FOXP2O15409 715 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 IGSF3O75054 1194 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 GLRX3O76003 335 aaKnown RBP6.15□□□□□ -1.42
ITGB1-214ENST00000488427 CPEP16870 476 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 BMP7P18075 431 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 SDSP20132 328 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 CANXP27824 592 aaKnown RBP6.15□□□□□ -1.42
ITGB1-214ENST00000488427 SDHAP31040 664 aa6.15□□□□□ -1.42
ITGB1-214ENST00000488427 SOX5P35711 763 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms