RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TCEANC2Q96MN5 208 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 INPP4AQ96PE3 977 aaPredicted RBP10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 UHRF1Q96T88 793 aaPredicted RBP10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 C17orf80Q9BSJ5 609 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 ZBED2Q9BTP6 218 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 KATNAL1Q9BW62 490 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 TUT1Q9H6E5 874 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 SUGCTQ9HAC7 445 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 MAP3K20Q9NYL2 800 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 FRMPD4Q14CM0 1322 aa10.73□□□□□ -0.69
TMEM39A-208ENST00000486159 MICAL3Q7RTP6 2002 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 C17orf102A2RUQ5 167 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 LINC01553A4QN01 128 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 RSPH10B2B2RC85 870 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 KIF28PB7ZC32 967 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 ADAMTS3O15072 1205 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 STX6O43752 255 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 PFKFB2O60825 505 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 UPP2O95045 317 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 GJB5O95377 273 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 RSPH10BP0C881 870 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 POU3F3P20264 500 aaPredicted RBP10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 HOXC8P31273 242 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 ICAM3P32942 547 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 HMGN5P82970 282 aaKnown RBP10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 CSPP1Q1MSJ5 1256 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 NFXL1Q6ZNB6 911 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 RUFY4Q6ZNE9 571 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 CCDC83Q8IWF9 413 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 SMARCC2Q8TAQ2 1214 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 KHSRPQ92945 711 aaKnown RBP eCLIP10.72□□□□□ -0.693e-7■■■■□ 24
TMEM39A-208ENST00000486159 GTF3C6Q969F1 213 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 PGBD1Q96JS3 809 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 ZDHHC9Q9Y397 364 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 SIP14410 1827 aa10.72□□□□□ -0.69
TMEM39A-208ENST00000486159 ABHD14A-ACY1A0A1B0GW23 586 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 GSTTP1A0A1W2PQM5 241 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 NOP56O00567 594 aaKnown RBP10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 TRANK1O15050 2925 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 ATMINO43313 823 aaPredicted RBP10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 ZSCAN22P10073 491 aaPredicted RBP10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 TGFB3P10600 412 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 ITGB5P18084 799 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 MARK3P27448 753 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 GJB2P29033 226 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 ADAM17P78536 824 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 IKBKEQ14164 716 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 SART3Q15020 963 aaKnown RBP10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 PLEKHG4Q58EX7 1191 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 TYW1BQ6NUM6 668 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 KCNV1Q6PIU1 500 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 METTL7BQ6UX53 244 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 MYOCDQ8IZQ8 938 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 SAMD3Q8N6K7 520 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 CTCFLQ8NI51 663 aaPredicted RBP10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 CYP2W1Q8TAV3 490 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 RRP36Q96EU6 259 aaKnown RBP10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 TMEM87BQ96K49 555 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 UIMC1Q96RL1 719 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 RAD9AQ99638 391 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 SPZ1Q9BXG8 430 aa10.71□□□□□ -0.69
TMEM39A-208ENST00000486159 CCDC69A6NI79 296 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 FIBPO43427 364 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 GTPBP6O43824 516 aaPredicted RBP10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 DDAH1O94760 285 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 LARGE1O95461 756 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 CHRNA1P02708 482 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 KCNA2P16389 499 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 SYT1P21579 422 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 ERVK-21P61565 698 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 ARHGAP4P98171 946 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 KLHL40Q2TBA0 621 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 PCNX4Q63HM2 1172 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 LMBR1Q8WVP7 490 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 BRF1Q92994 677 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 CD320Q9NPF0 282 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 BRPF3Q9ULD4 1205 aa10.7□□□□□ -0.7
TMEM39A-208ENST00000486159 PIK3CDO00329 1044 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 MBD3O95983 291 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 TCF7P36402 384 aaPredicted RBP10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 PKP1Q13835 747 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 NEDD9Q14511 834 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 GNPTABQ3T906 1256 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 TMTC3Q6ZXV5 915 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 MICU3Q86XE3 530 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 TMTC2Q8N394 836 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 PCYT2Q99447 389 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 MAP3K14Q99558 947 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 EPHX3Q9H6B9 360 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 PSTPIP2Q9H939 334 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 TMEM260Q9NX78 707 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 PCDHA6Q9UN73 950 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 PCDHA8Q9Y5H6 950 aa10.69□□□□□ -0.7
TMEM39A-208ENST00000486159 PARNO95453 639 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 F13A1P00488 732 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 ARP10275 920 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 NCLP19338 710 aaKnown RBP10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 KIF5BP33176 963 aa10.68□□□□□ -0.7
TMEM39A-208ENST00000486159 LIFRP42702 1097 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms