RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 CFAP221Q4G0U5 840 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 EMBQ6PCB8 327 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 KCNK18Q7Z418 384 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 CCDC84Q86UT8 332 aaPredicted RBP12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 TRIM42Q8IWZ5 723 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 LARP4BQ92615 738 aaKnown RBP12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 AK8Q96MA6 479 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 PACSIN1Q9BY11 444 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 C6orf50Q9HD87 102 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.09□□□□□ -0.475e-8■■■■■ 198.7
LRRFIP1-211ENST00000478958 BLOC1S4Q9NUP1 217 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 SEC63Q9UGP8 760 aaKnown RBP12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 ADAMTS1Q9UHI8 967 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 SHANK3Q9BYB0 1731 aa12.09□□□□□ -0.47
LRRFIP1-211ENST00000478958 LAD1O00515 517 aa12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 TPD52L2O43399 206 aaKnown RBP12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 SLC37A4O43826 429 aa12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 GCLCP48506 637 aaPredicted RBP12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 GRB10Q13322 594 aa12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 RAPGEF1Q13905 1077 aa12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 SNX29Q8TEQ0 813 aa12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 BAP1Q92560 729 aa12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 DDX12PQ92771 950 aa12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 STAMBPL1Q96FJ0 436 aa12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 RNPC3Q96LT9 517 aaKnown RBP12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 PAGR1Q9BTK6 254 aa12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 TRIM4Q9C037 500 aa12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 CUEDC2Q9H467 287 aa12.08□□□□□ -0.47
LRRFIP1-211ENST00000478958 LRP5O75197 1615 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 ZNF233A6NK53 670 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 MARCH6O60337 910 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 KLRC1P26715 233 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 CDK17Q00537 523 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 CALCRLQ16602 461 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 SBK1Q52WX2 424 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 FIGNQ5HY92 759 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 KRT25Q7Z3Z0 450 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 REXO1Q8N1G1 1221 aaKnown RBP12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 ZNF473Q8WTR7 871 aaKnown RBP12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 TSPAN18Q96SJ8 248 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 ANKIB1Q9P2G1 1089 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 LDHBP07195 334 aaKnown RBP12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 TNNI2P48788 182 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 KIAA0753Q2KHM9 967 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 MFSD4BQ5TF39 518 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 IFT20Q8IY31 132 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 LSM14BQ9BX40 385 aaKnown RBP12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 ZMYND12Q9H0C1 365 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 BAIAP2L1Q9UHR4 511 aa12.08□□□□□ -0.48
LRRFIP1-211ENST00000478958 PALM3A6NDB9 673 aaPredicted RBP12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 SMIM24O75264 130 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 GNA11P29992 359 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 SKOR1P84550 965 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 KCNMA1Q12791 1236 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 DDB1Q16531 1140 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 PDXDC1Q6P996 788 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 FAM133AQ8N9E0 248 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 OR2W6PQ8NHA6 318 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 MMADHCQ9H3L0 296 aaPredicted RBP12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 C15orf41Q9Y2V0 281 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 PLCH1Q4KWH8 1693 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 OPLAHO14841 1288 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 BACH1O14867 736 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 TLR2O60603 784 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 RNF8O76064 485 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 HNRNPH3P31942 346 aaKnown RBP12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 SLC9C1Q4G0N8 1177 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 FAM83BQ5T0W9 1011 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 TBC1D9BQ66K14 1250 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 UNC13DQ70J99 1090 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 BICD1Q96G01 975 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 PNMA5Q96PV4 448 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 EYA3Q99504 573 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 FGFBP2Q9BYJ0 223 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 EPN3Q9H201 632 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 NOD2Q9HC29 1040 aa12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 PPANQ9NQ55 473 aaKnown RBP12.07□□□□□ -0.48
LRRFIP1-211ENST00000478958 ZNF335Q9H4Z2 1342 aaPredicted RBP12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 STRCP1A6NGW2 1772 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 USP17L5A8MUK1 530 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 RASA1P20936 1047 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 SLMAPQ14BN4 828 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 SF3B3Q15393 1217 aaKnown RBP12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 ACBD5Q5T8D3 534 aaPredicted RBP12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 SFMBT2Q5VUG0 894 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 ALS2CLQ60I27 953 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 HGSNATQ68CP4 663 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 DDX42Q86XP3 938 aaKnown RBP eCLIP12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 DAGLBQ8NCG7 672 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 ZCWPW1Q9H0M4 648 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 EBF2Q9HAK2 575 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 MAGEF1Q9HAY2 307 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 SRP68Q9UHB9 627 aaKnown RBP12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 A0A087X0T9 212 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 RBM47A0AV96 593 aaKnown RBP12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 KCNK3O14649 394 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 LINGO3P0C6S8 592 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms