RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 CCDC150Q8NCX0 1101 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 ENGASEQ8NFI3 743 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 GIMAP7Q8NHV1 300 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 SHKBP1Q8TBC3 707 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 RPGRQ92834 1020 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 GOLPH3LQ9H4A5 285 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 EPB41L4AQ9HCS5 686 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 IMPACTQ9P2X3 320 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 MINPP1Q9UNW1 487 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 LEMD3Q9Y2U8 911 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 BCL9LQ86UU0 1499 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 TNKSO95271 1327 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 DDX60Q8IY21 1712 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 DOCK2Q92608 1830 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 SCN7AQ01118 1682 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 TMEM238LA0A1B0GVL6 79 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 PRR19A6NJB7 356 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 TRIM75PA6NK02 468 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 KIAA1324LA8MWY0 1029 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 IKBKBO14920 756 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 KCNQ2O43526 872 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 PRKAB2O43741 272 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 ORC4O43929 436 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 ADH5P11766 374 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 RXRAP19793 462 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 CALML3P27482 149 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 RXRBP28702 533 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 SNW1Q13573 536 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 GRM2Q14416 872 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 TBC1D9BQ66K14 1250 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 CCDC186Q7Z3E2 898 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 FBXO33Q7Z6M2 555 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 KRTAP19-1Q8IUB9 90 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 DIS3L2Q8IYB7 885 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 ELOA2Q8IYF1 753 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 CRACR2BQ8N4Y2 399 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 AOPEPQ8N6M6 819 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 CNBD1Q8NA66 436 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 CNNM3Q8NE01 707 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 GLIS3Q8NEA6 775 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 PHKBQ93100 1093 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 FERMT2Q96AC1 680 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 CORO1BQ9BR76 489 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 MYL10Q9BUA6 226 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 FTOQ9C0B1 505 aaKnown RBP eCLIP6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 TMX4Q9H1E5 349 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 TTC12Q9H892 705 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 SPTLC3Q9NUV7 552 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 AKAP11Q9UKA4 1901 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 MYH15Q9Y2K3 1946 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 DUOX1Q9NRD9 1551 aa6.69□□□□□ -1.34
ATPAF1-204ENST00000474020 COL5A3P25940 1745 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 FAM95CA0A1B0GW59 222 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 TSPY2A6NKD2 308 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 KIF28PB7ZC32 967 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 PRPF3O43395 683 aaKnown RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 MED26O95402 600 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 TUBB4AP04350 444 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 LDHBP07195 334 aaKnown RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 PTGS1P23219 599 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 MARCKSP29966 332 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 USP11P51784 963 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 MYL5Q02045 173 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 GRAPQ13588 217 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 HSP90AA2PQ14568 343 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 DSC3Q14574 896 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 IQCB1Q15051 598 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 NTRK3Q16288 839 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 TPD52L1Q16890 204 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 SBK1Q52WX2 424 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 RESP18Q5W5W9 173 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 CDPF1Q6NVV7 123 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 TMC4Q7Z404 712 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 FAM177A1Q8N128 213 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 TRIML1Q8N9V2 468 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 CCDC148Q8NFR7 591 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 GRAPLQ8TC17 118 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 KIAA1524Q8TCG1 905 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 EPS8L3Q8TE67 593 aaKnown RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 EZH1Q92800 747 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 RBM17Q96I25 401 aaKnown RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 FAM84BQ96KN1 310 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 MFSD14AQ96MC6 490 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 ZNF830Q96NB3 372 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 YIPF2Q9BWQ6 316 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 KAT14Q9H8E8 782 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 KCNH3Q9ULD8 1083 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 MORC2Q9Y6X9 1032 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 XDHP47989 1333 aa6.68□□□□□ -1.34
ATPAF1-204ENST00000474020 C4AP0C0L4 1744 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 C4BP0C0L5 1744 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 FAM237AA0A1B0GTK4 181 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 TREHO43280 583 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 ECEL1O95672 775 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 SERPINC1P01008 464 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 SFPQP23246 707 aaKnown RBP eCLIP6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 TRAPPC10P48553 1259 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 MECOMQ03112 1051 aa6.67□□□□□ -1.34
ATPAF1-204ENST00000474020 AP3B2Q13367 1082 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms