RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 STAG2Q8N3U4 1231 aa18.82■□□□□ 0.6
HPS4-210ENST00000473782 AMNQ9BXJ7 453 aa18.82■□□□□ 0.6
HPS4-210ENST00000473782 CDH22Q9UJ99 828 aa18.82■□□□□ 0.6
HPS4-210ENST00000473782 NRCAMQ92823 1304 aa18.81■□□□□ 0.6
HPS4-210ENST00000473782 EP300Q09472 2414 aaPredicted RBP18.81■□□□□ 0.6
HPS4-210ENST00000473782 BRD1O95696 1058 aa18.81■□□□□ 0.6
HPS4-210ENST00000473782 PCP11498 1178 aaKnown RBP18.81■□□□□ 0.6
HPS4-210ENST00000473782 CD52P31358 61 aa18.81■□□□□ 0.6
HPS4-210ENST00000473782 TSHZ1Q6ZSZ6 1077 aa18.81■□□□□ 0.6
HPS4-210ENST00000473782 NPAS4Q8IUM7 802 aa18.81■□□□□ 0.6
HPS4-210ENST00000473782 KREMEN2Q8NCW0 462 aa18.81■□□□□ 0.6
HPS4-210ENST00000473782 INPP4AQ96PE3 977 aaPredicted RBP18.81■□□□□ 0.6
HPS4-210ENST00000473782 CDY2AQ9Y6F7 541 aa18.81■□□□□ 0.6
HPS4-210ENST00000473782 NCOR2Q9Y618 2525 aa18.81■□□□□ 0.6
HPS4-210ENST00000473782 EPG5Q9HCE0 2579 aa18.81■□□□□ 0.6
HPS4-210ENST00000473782 MED19A0JLT2 244 aaPredicted RBP18.8■□□□□ 0.6
HPS4-210ENST00000473782 MBLAC1A4D2B0 266 aaPredicted RBP18.8■□□□□ 0.6
HPS4-210ENST00000473782 NOP56O00567 594 aaKnown RBP18.8■□□□□ 0.6
HPS4-210ENST00000473782 FSCN2O14926 492 aa18.8■□□□□ 0.6
HPS4-210ENST00000473782 PPFIA3O75145 1194 aa18.8■□□□□ 0.6
HPS4-210ENST00000473782 SP100P23497 879 aaPredicted RBP18.8■□□□□ 0.6
HPS4-210ENST00000473782 CCND2P30279 289 aa18.8■□□□□ 0.6
HPS4-210ENST00000473782 UTP14CQ5TAP6 766 aaKnown RBP18.8■□□□□ 0.6
HPS4-210ENST00000473782 TAF2Q6P1X5 1199 aa18.8■□□□□ 0.6
HPS4-210ENST00000473782 DNAJB3Q8WWF6 145 aa18.8■□□□□ 0.6
HPS4-210ENST00000473782 ZBTB10Q96DT7 871 aa18.8■□□□□ 0.6
HPS4-210ENST00000473782 CACNA1BQ00975 2339 aa18.8■□□□□ 0.6
HPS4-210ENST00000473782 FRMPD4Q14CM0 1322 aa18.79■□□□□ 0.6
HPS4-210ENST00000473782 MX1P20591 662 aa18.79■□□□□ 0.6
HPS4-210ENST00000473782 MCMDC2Q4G0Z9 681 aa18.79■□□□□ 0.6
HPS4-210ENST00000473782 ANKRD54Q6NXT1 300 aa18.79■□□□□ 0.6
HPS4-210ENST00000473782 SAMD3Q8N6K7 520 aa18.79■□□□□ 0.6
HPS4-210ENST00000473782 ENAHQ8N8S7 591 aaPredicted RBP18.79■□□□□ 0.6
HPS4-210ENST00000473782 ESR2Q92731 530 aa18.79■□□□□ 0.6
HPS4-210ENST00000473782 NKD2Q969F2 451 aaPredicted RBP18.79■□□□□ 0.6
HPS4-210ENST00000473782 NEK1Q96PY6 1258 aa18.79■□□□□ 0.6
HPS4-210ENST00000473782 APOL5Q9BWW9 433 aa18.79■□□□□ 0.6
HPS4-210ENST00000473782 HCSTQ9UBK5 93 aa18.79■□□□□ 0.6
HPS4-210ENST00000473782 DOCK5Q9H7D0 1870 aa18.79■□□□□ 0.6
HPS4-210ENST00000473782 PARP1P09874 1014 aaKnown RBP18.78■□□□□ 0.6
HPS4-210ENST00000473782 NEDD9Q14511 834 aa18.78■□□□□ 0.6
HPS4-210ENST00000473782 CDCA3Q99618 268 aaPredicted RBP18.78■□□□□ 0.6
HPS4-210ENST00000473782 TMX1Q9H3N1 280 aa18.78■□□□□ 0.6
HPS4-210ENST00000473782 KAT14Q9H8E8 782 aa18.78■□□□□ 0.6
HPS4-210ENST00000473782 PCDHA1Q9Y5I3 950 aa18.78■□□□□ 0.6
HPS4-210ENST00000473782 MYO10Q9HD67 2058 aa18.78■□□□□ 0.6
HPS4-210ENST00000473782 FRYLO94915 3013 aa18.78■□□□□ 0.6
HPS4-210ENST00000473782 MYH6P13533 1939 aa18.78■□□□□ 0.6
HPS4-210ENST00000473782 KMT2BQ9UMN6 2715 aaPredicted RBP18.77■□□□□ 0.6
HPS4-210ENST00000473782 ZBTB5O15062 677 aa18.77■□□□□ 0.6
HPS4-210ENST00000473782 DHX16O60231 1041 aaKnown RBP18.77■□□□□ 0.6
HPS4-210ENST00000473782 UBE3AQ05086 875 aa18.77■□□□□ 0.6
HPS4-210ENST00000473782 ASTLQ6HA08 431 aaPredicted RBP18.77■□□□□ 0.6
HPS4-210ENST00000473782 FCHSD1Q86WN1 690 aa18.77■□□□□ 0.6
HPS4-210ENST00000473782 MICAL1Q8TDZ2 1067 aa18.77■□□□□ 0.6
HPS4-210ENST00000473782 EVI5LQ96CN4 794 aa18.77■□□□□ 0.6
HPS4-210ENST00000473782 RTEL1Q9NZ71 1219 aa18.77■□□□□ 0.6
HPS4-210ENST00000473782 ZNF215Q9UL58 517 aaPredicted RBP18.77■□□□□ 0.6
HPS4-210ENST00000473782 SORCS3Q9UPU3 1222 aa18.77■□□□□ 0.6
HPS4-210ENST00000473782 C2CD4DB7Z1M9 353 aa18.76■□□□□ 0.59
HPS4-210ENST00000473782 TECP42680 631 aa18.76■□□□□ 0.59
HPS4-210ENST00000473782 ZBTB33Q86T24 672 aa18.76■□□□□ 0.59
HPS4-210ENST00000473782 UBALD2Q8IYN6 164 aa18.76■□□□□ 0.59
HPS4-210ENST00000473782 RASGRP4Q8TDF6 673 aa18.76■□□□□ 0.59
HPS4-210ENST00000473782 RMDN1Q96DB5 314 aa18.76■□□□□ 0.59
HPS4-210ENST00000473782 ZSCAN10Q96SZ4 725 aaPredicted RBP18.76■□□□□ 0.59
HPS4-210ENST00000473782 PADI3Q9ULW8 664 aa18.76■□□□□ 0.59
HPS4-210ENST00000473782 SQORQ9Y6N5 450 aa18.76■□□□□ 0.59
HPS4-210ENST00000473782 GCOM1H8Y6P7 765 aaPredicted RBP18.75■□□□□ 0.59
HPS4-210ENST00000473782 FGF18O76093 207 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 POLR2MP0CAP2 368 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 SCG2P13521 617 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 MRPS6P82932 125 aaKnown RBP18.75■□□□□ 0.59
HPS4-210ENST00000473782 SP4Q02446 784 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 PPFIA1Q13136 1202 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 MTMR3Q13615 1198 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 GRIK4Q16099 956 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 CWF19L1Q69YN2 538 aaKnown RBP18.75■□□□□ 0.59
HPS4-210ENST00000473782 SENP7Q9BQF6 1050 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 FTHL17Q9BXU8 183 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 RNF41Q9H4P4 317 aaPredicted RBP18.75■□□□□ 0.59
HPS4-210ENST00000473782 ZSWIM5Q9P217 1185 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 MAD2L2Q9UI95 211 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 TUBE1Q9UJT0 475 aa18.75■□□□□ 0.59
HPS4-210ENST00000473782 GSTTP1A0A1W2PQM5 241 aa18.74■□□□□ 0.59
HPS4-210ENST00000473782 FIBPO43427 364 aa18.74■□□□□ 0.59
HPS4-210ENST00000473782 MGEA5O60502 916 aa18.74■□□□□ 0.59
HPS4-210ENST00000473782 ATP9AO75110 1047 aa18.74■□□□□ 0.59
HPS4-210ENST00000473782 KRT37O76014 449 aa18.74■□□□□ 0.59
HPS4-210ENST00000473782 APOBRQ0VD83 1088 aa18.74■□□□□ 0.59
HPS4-210ENST00000473782 NMIQ13287 307 aaPredicted RBP18.74■□□□□ 0.59
HPS4-210ENST00000473782 GNPTABQ3T906 1256 aa18.74■□□□□ 0.59
HPS4-210ENST00000473782 RSPH3Q86UC2 560 aa18.74■□□□□ 0.59
HPS4-210ENST00000473782 POMKQ9H5K3 350 aa18.74■□□□□ 0.59
HPS4-210ENST00000473782 HIDE1A8MVS5 230 aa18.73■□□□□ 0.59
HPS4-210ENST00000473782 TRIM6-TRIM34B2RNG4 842 aa18.73■□□□□ 0.59
HPS4-210ENST00000473782 B4E1Z4 1266 aa18.73■□□□□ 0.59
HPS4-210ENST00000473782 KLRF2D3W0D1 207 aa18.73■□□□□ 0.59
HPS4-210ENST00000473782 PI15O43692 258 aa18.73■□□□□ 0.59
HPS4-210ENST00000473782 STAM2O75886 525 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms