RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ZNF543Q08ER8 600 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 MOGSQ13724 837 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 NFKBIBQ15653 356 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 SYNE3Q6ZMZ3 975 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 TMTC3Q6ZXV5 915 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 ERO1BQ86YB8 467 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 PHKBQ93100 1093 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 TRIM11Q96F44 468 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 MAP3K14Q99558 947 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 UBA5Q9GZZ9 404 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 CHRDQ9H2X0 955 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 FBXO28Q9NVF7 368 aa5.48□□□□□ -1.53
SF3B1-208ENST00000470268 DOCK1Q14185 1865 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 ELOA3CA0A087WX78 387 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-208ENST00000470268 hCG_1642624A0A1W2PR95 340 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 ELOA3DA6NLF2 546 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-208ENST00000470268 KLRF2D3W0D1 207 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 SASH3O75995 380 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 MAP3K6O95382 1288 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 PARP1P09874 1014 aaKnown RBP5.47□□□□□ -1.53
SF3B1-208ENST00000470268 CALM1P0DP23 149 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 CALM2P0DP24 149 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 CALM3P0DP25 149 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 VCAM1P19320 739 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 CD33P20138 364 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 GNA15P30679 374 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 SLC1A4P43007 532 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 FSTL1Q12841 308 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 PPIL2Q13356 520 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 ELOA3BQ3SY89 546 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 FAM83BQ5T0W9 1011 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 TREML2Q5T2D2 321 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 TTC39BQ5VTQ0 682 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-208ENST00000470268 ELOA3Q8NG57 546 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 CTCFLQ8NI51 663 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-208ENST00000470268 SMARCC2Q8TAQ2 1214 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 CCDC74AQ96AQ1 378 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 SHISA4Q96DD7 197 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 WNK4Q96J92 1243 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 C12orf42Q96LP6 360 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 AIFM3Q96NN9 605 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 NACC1Q96RE7 527 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 FEZ1Q99689 392 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 AS3MTQ9HBK9 375 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 CNTN3Q9P232 1028 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 SYNPO2Q9UMS6 1093 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 MYH8P13535 1937 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 A0A0G2JLL6 359 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-208ENST00000470268 PTPDC1A2A3K4 754 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 TMEM232C9JQI7 657 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 BMP3P12645 472 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 IFNAR1P17181 557 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 SPEM2Q0P670 501 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 BECN1Q14457 450 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 PKN1Q16512 942 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 RSPO4Q2I0M5 234 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-208ENST00000470268 CCDC96Q2M329 555 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 ASPRV1Q53RT3 343 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 PRRT2Q7Z6L0 340 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-208ENST00000470268 RASAL3Q86YV0 1011 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 C1orf127Q8N9H9 656 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 DCAF4Q8WV16 495 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 UBE2Q2Q8WVN8 375 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 PIBF1Q8WXW3 757 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 LPAR1Q92633 364 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 DDX11Q96FC9 970 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 INTS4Q96HW7 963 aaKnown RBP5.47□□□□□ -1.53
SF3B1-208ENST00000470268 SH2D4AQ9H788 454 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 GJB4Q9NTQ9 266 aa5.47□□□□□ -1.53
SF3B1-208ENST00000470268 PHIPQ8WWQ0 1821 aa5.46□□□□□ -1.53
SF3B1-208ENST00000470268 ATAD5Q96QE3 1844 aa5.46□□□□□ -1.53
SF3B1-208ENST00000470268 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-208ENST00000470268 FAM155AB1AL88 458 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-208ENST00000470268 C19orf81C9J6K1 198 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 CXCL11O14625 94 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 CPLX1O14810 134 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 GIPC1O14908 333 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 WDR46O15213 610 aaKnown RBP5.46□□□□□ -1.54
SF3B1-208ENST00000470268 SORBS3O60504 671 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 TAL1P17542 331 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-208ENST00000470268 TARSP26639 723 aaKnown RBP5.46□□□□□ -1.54
SF3B1-208ENST00000470268 GJB2P29033 226 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 KIF5BP33176 963 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 DDIT3P35638 169 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 SOX18P35713 384 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 ZNF157P51786 506 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-208ENST00000470268 USP14P54578 494 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 SNAP25P60880 206 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 HTRA3P83110 453 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 PSMD2Q13200 908 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 PKP1Q13835 747 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 PPP2R5BQ15173 497 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 GPATCH4Q5T3I0 446 aaKnown RBP5.46□□□□□ -1.54
SF3B1-208ENST00000470268 RGMBQ6NW40 437 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 BTNL9Q6UXG8 535 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 GALNT12Q8IXK2 581 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 ADGRF4Q8IZF3 695 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 OR13H1Q8NG92 308 aa5.46□□□□□ -1.54
SF3B1-208ENST00000470268 PTPN18Q99952 460 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms