RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 PXYLP1Q8TE99 480 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 TRIB2Q92519 343 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 SYMPKQ92797 1274 aaKnown RBP6.7□□□□□ -1.34
USP39-213ENST00000467885 COPS5Q92905 334 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 CDHR1Q96JP9 859 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 PCYT2Q99447 389 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 MPHOSPH6Q99547 160 aaKnown RBP6.7□□□□□ -1.34
USP39-213ENST00000467885 EIF2AK1Q9BQI3 630 aaKnown RBP6.7□□□□□ -1.34
USP39-213ENST00000467885 BEGAINQ9BUH8 593 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 POLR3CQ9BUI4 534 aaPredicted RBP6.7□□□□□ -1.34
USP39-213ENST00000467885 VTA1Q9NP79 307 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 RGL1Q9NZL6 768 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 PKD2L1Q9P0L9 805 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 KCNH3Q9ULD8 1083 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 GNEQ9Y223 722 aaKnown RBP6.7□□□□□ -1.34
USP39-213ENST00000467885 PARP14Q460N5 1801 aa6.7□□□□□ -1.34
USP39-213ENST00000467885 GOLGA6L4A6NEF3 574 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 PPP1R3GB7ZBB8 358 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 CTAGE5O15320 804 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 FOXN1O15353 648 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 POLR2DO15514 142 aaKnown RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 DYNC1LI2O43237 492 aaPredicted RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 ADCY3O60266 1144 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 GAS7O60861 476 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 PPFIA4O75335 1185 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 FARP2O94887 1054 aaPredicted RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 XRCC6P12956 609 aaKnown RBP eCLIP6.69□□□□□ -1.34
USP39-213ENST00000467885 ELNP15502 786 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 PFKFB1P16118 471 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 ATP4AP20648 1035 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 UBA7P41226 1012 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 PRMT2P55345 433 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 ACTR2P61160 394 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 NKX3-2P78367 333 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 TNFAIP2Q03169 654 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 ARHGAP1Q07960 439 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 LAMC2Q13753 1193 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 SKOR2Q2VWA4 1001 aaPredicted RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 HSDL1Q3SXM5 330 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 GJC2Q5T442 439 aaPredicted RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 MAP3K21Q5TCX8 1036 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 ZNF746Q6NUN9 644 aaPredicted RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 SWSAP1Q6NVH7 229 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 KCNK18Q7Z418 384 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 SH3RF1Q7Z6J0 888 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 CABP7Q86V35 215 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 FBXO16Q8IX29 292 aaPredicted RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 DHX37Q8IY37 1157 aaKnown RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 ELOA2Q8IYF1 753 aaPredicted RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 TRMT44Q8IYL2 757 aaKnown RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 FSIP1Q8NA03 581 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 GIMAP8Q8ND71 665 aaPredicted RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 SCFD2Q8WU76 684 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 SEPT1Q8WYJ6 367 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 DYDC2Q96IM9 177 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 TIGD1Q96MW7 591 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 PLIN2Q99541 437 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 GPR20Q99678 358 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 MTRQ99707 1265 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 APBA2Q99767 749 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 TEKT3Q9BXF9 490 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 MLXIPQ9HAP2 919 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 DISC1Q9NRI5 854 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 BLOC1S4Q9NUP1 217 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 DACT1Q9NYF0 836 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 WRAP73Q9P2S5 460 aaPredicted RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 SLC9A2Q9UBY0 812 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 SERTAD1Q9UHV2 236 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 NRBP1Q9UHY1 535 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 RABGEF1Q9UJ41 708 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 FAM184BQ9ULE4 1060 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 PTPN22Q9Y2R2 807 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 Q9Y3F1 56 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 PCDHA10Q9Y5I2 948 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 MAFBQ9Y5Q3 323 aaPredicted RBP6.69□□□□□ -1.34
USP39-213ENST00000467885 A0A0G2JMZ2 1700 aa6.69□□□□□ -1.34
USP39-213ENST00000467885 A6NJR5 290 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 DDX11L8A8MPP1 907 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 DDX39AO00148 427 aaKnown RBP6.68□□□□□ -1.34
USP39-213ENST00000467885 SLC26A4O43511 780 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 ACTN4O43707 911 aaKnown RBP6.68□□□□□ -1.34
USP39-213ENST00000467885 ZNF862O60290 1169 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 SORBS3O60504 671 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 LGR5O75473 907 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 LYPLA2O95372 231 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 GGPS1O95749 300 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 P4HBP07237 508 aaKnown RBP6.68□□□□□ -1.34
USP39-213ENST00000467885 SLFN14P0C7P3 912 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 HSPA8P11142 646 aaKnown RBP6.68□□□□□ -1.34
USP39-213ENST00000467885 CYBAP13498 195 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 MUTP22033 750 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 UBA1P22314 1058 aaKnown RBP6.68□□□□□ -1.34
USP39-213ENST00000467885 SFNP31947 248 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 SYKP43405 635 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 KRT76Q01546 638 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 FAM160A1Q05DH4 1040 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 CTTNQ14247 550 aaKnown RBP6.68□□□□□ -1.34
USP39-213ENST00000467885 TTLL4Q14679 1199 aa6.68□□□□□ -1.34
USP39-213ENST00000467885 KARSQ15046 597 aaKnown RBP6.68□□□□□ -1.34
USP39-213ENST00000467885 TMEM266Q2M3C6 531 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms