RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	SLC37A4	O43826	429 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	EDIL3	O43854	480 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	ABCB7	O75027	752 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	PSAP	P07602	524 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	GNAT1	P11488	350 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	GCFC2	P16383	781 aa	Known RBP	10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	EPHB4	P54760	987 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	SHH	Q15465	462 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970		Q4G0T1	1027 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	PDXDC2P	Q6P474	469 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	MIER3	Q7Z3K6	550 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	DEFB128	Q7Z7B8	93 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	SESTD1	Q86VW0	696 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	SLC5A5	Q92911	643 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	PCYT2	Q99447	389 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	NAP1L4	Q99733	375 aa	Known RBP	10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	WNT8A	Q9H1J5	351 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	UNC45A	Q9H3U1	944 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	ZNF302	Q9NR11	478 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	TANC1	Q9C0D5	1861 aa		10.86	□□□□□ -0.67
PSMD4-208	ENST00000462970	EMSY	Q7Z589	1322 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	WDR64	B1ANS9	1081 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	TREH	O43280	583 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	LGR5	O75473	907 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	BAG4	O95429	457 aa	Known RBP	10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	CYP3A7	P24462	503 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	MCM7	P33993	719 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	BMP8B	P34820	402 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	THPO	P40225	353 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	PTK7	Q13308	1070 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	HIC1	Q14526	733 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	PLCB4	Q15147	1175 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	GRIK4	Q16099	956 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	C9orf50	Q5SZB4	431 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	MOXD1	Q6UVY6	613 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	ABHD15	Q6UXT9	468 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	TDH	Q8IZJ6	230 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	FBXO18	Q8NFZ0	1043 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	LMBR1	Q8WVP7	490 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	TRAPPC12	Q8WVT3	735 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	DHX38	Q92620	1227 aa	Known RBP	10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	TNFRSF25	Q93038	417 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	RNPC3	Q96LT9	517 aa	Known RBP	10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	RIT2	Q99578	217 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	DISC1	Q9NRI5	854 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	GABBR1	Q9UBS5	961 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	PCDHA10	Q9Y5I2	948 aa		10.85	□□□□□ -0.67
PSMD4-208	ENST00000462970	LOXHD1	Q8IVV2	1947 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	TET1	Q8NFU7	2136 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	POTEB3	A0JP26	581 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	ZBBX	A8MT70	800 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	CTSH	P09668	335 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	INSRR	P14616	1297 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	SELP	P16109	830 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	JAK3	P52333	1124 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	CALCRL	Q16602	461 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	NCAPH2	Q6IBW4	605 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	PPP4R3A	Q6IN85	833 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	POTEB	Q6S5H4	581 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	LRRC8D	Q7L1W4	858 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	PLPPR4	Q7Z2D5	763 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	SERINC5	Q86VE9	423 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	ETNPPL	Q8TBG4	499 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	CAGE1	Q8TC20	777 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	WNT8B	Q93098	351 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	ZBTB10	Q96DT7	871 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	MBOAT7	Q96N66	472 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	FAM49A	Q9H0Q0	323 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	IL23A	Q9NPF7	189 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	NOL7	Q9UMY1	257 aa	Known RBP	10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	RANBP2	P49792	3224 aa	Known RBP	10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	NRCAM	Q92823	1304 aa		10.84	□□□□□ -0.67
PSMD4-208	ENST00000462970	VPS37C	A5D8V6	355 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	KIF28P	B7ZC32	967 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	RBAK-RBAKDN	I3L0D1	243 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	PITPNM1	O00562	1244 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	NEMF	O60524	1076 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	PSMD10	O75832	226 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	ATG7	O95352	703 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	FGB	P02675	491 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	HSP90AA1	P07900	732 aa	Known RBP	10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	CKB	P12277	381 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	SFN	P31947	248 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	TXK	P42681	527 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	ZNF174	Q15697	407 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	ZNF618	Q5T7W0	954 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	LARP1B	Q659C4	914 aa	Known RBP	10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	RUFY4	Q6ZNE9	571 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	ZNF365	Q70YC5	407 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	NOSTRIN	Q8IVI9	506 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	HSCB	Q8IWL3	235 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	RPUSD2	Q8IZ73	545 aa	Known RBP	10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	AFAP1L1	Q8TED9	768 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	TNPO1	Q92973	898 aa	Known RBP	10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms