RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 UBE4BO95155 1302 aa13.77□□□□□ -0.2
ECHDC1-209ENST00000454591 G3V3G9 751 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 EIF3DO15371 548 aaKnown RBP eCLIP13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 PLA2G6O60733 806 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 N4BP1O75113 896 aaKnown RBP13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 GFPT2O94808 682 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 NDUFB10O96000 172 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 HNRNPH2P55795 449 aaKnown RBP13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 POLR2FP61218 127 aaKnown RBP13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 GFPT1Q06210 699 aaPredicted RBP13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 KCNH2Q12809 1159 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 ABCB5Q2M3G0 1257 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 DCAF8Q5TAQ9 597 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 EMBQ6PCB8 327 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 COL23A1Q86Y22 540 aaPredicted RBP13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 EIF1ADQ8N9N8 165 aaKnown RBP13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 CAVIN3Q969G5 261 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 SELENOOQ9BVL4 669 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 DEFB129Q9H1M3 183 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 TUFT1Q9NNX1 390 aa13.77□□□□□ -0.21
ECHDC1-209ENST00000454591 IGLV3-22A0A075B6J6 115 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 POTEFA5A3E0 1075 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 AFPP02771 609 aaKnown RBP13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 POTEIP0CG38 1075 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 BMP3P12645 472 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 NR2F2P24468 414 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 RPL13P26373 211 aaKnown RBP13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 HOXD13P35453 343 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 EPHB4P54760 987 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 ATP2B2Q01814 1243 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 C2orf54Q08AI8 447 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 ASIC2Q16515 512 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 TDRD12Q587J7 1177 aaKnown RBP13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 MEI1Q5TIA1 1274 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 POTEGQ6S5H5 508 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 POTEEQ6S8J3 1075 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 GJA10Q969M2 543 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 MKNK1Q9BUB5 465 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 KCNQ5Q9NR82 932 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 ARMCX3Q9UH62 379 aaPredicted RBP13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 INTUQ9ULD6 942 aa13.76□□□□□ -0.21
ECHDC1-209ENST00000454591 NPHP3-ACAD11A0A0J9YXS1 232 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 SPDYE3A6NKU9 549 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 FAM86B1E9PN63 330 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 TULP2O00295 520 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 MSH4O15457 936 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 ECE2O60344 883 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 TRIM37O94972 964 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 SSBP05455 408 aaKnown RBP eCLIP13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 KRT18P05783 430 aaKnown RBP13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 IVLP07476 585 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 FAM86B2P0C5J1 330 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 MYBL2P10244 700 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 STAT3P40763 770 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 RASSF7Q02833 373 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 CFAP221Q4G0U5 840 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 PRR16Q569H4 304 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 NFRKBQ6P4R8 1299 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 IRF2BP2Q7Z5L9 587 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 SFR1Q86XK3 245 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 NELFCDQ8IXH7 590 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 CCDC102AQ96A19 550 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 SH3GL2Q99962 352 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 REEP2Q9BRK0 252 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 TRIM34Q9BYJ4 488 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 QTRT2Q9H974 415 aaKnown RBP13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 NLRC4Q9NPP4 1024 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 KCND2Q9NZV8 630 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 CWC15Q9P013 229 aaKnown RBP13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 STIM2Q9P246 746 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 SEL1LQ9UBV2 794 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 HERC5Q9UII4 1024 aaKnown RBP13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 HDAC9Q9UKV0 1011 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 ASTN1O14525 1302 aa13.75□□□□□ -0.21
ECHDC1-209ENST00000454591 A0A0A6YYK5 440 aaPredicted RBP13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 AGPSO00116 658 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 RNF40O75150 1001 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 EPB41P11171 864 aaKnown RBP13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 JAM2P57087 298 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 KLHL30Q0D2K2 578 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 PPP2R5CQ13362 524 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 EPHA7Q15375 998 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 IFI16Q16666 785 aaKnown RBP13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 ZSCAN26Q16670 478 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 ALS2CLQ60I27 953 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 CC2D2BQ6DHV5 1058 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 MREGQ8N565 214 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 TMEM174Q8WUU8 243 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 BORCS6Q96GS4 357 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 INPP4AQ96PE3 977 aaPredicted RBP13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 HSD17B14Q9BPX1 270 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 LRRC1Q9BTT6 524 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 GDF3Q9NR23 364 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 A0A087X0T9 212 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 BHMG1C9JSJ3 638 aaPredicted RBP13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 SHOX2O60902 331 aaPredicted RBP13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 PSMD10O75832 226 aa13.74□□□□□ -0.21
ECHDC1-209ENST00000454591 FAM228BP0C875 321 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 255.8 ms