RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 ADCY1Q08828 1119 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 MRPL28Q13084 256 aaKnown RBP9.95□□□□□ -0.82
SMC6-207ENST00000448223 RABL6Q3YEC7 729 aaPredicted RBP9.95□□□□□ -0.82
SMC6-207ENST00000448223 TTC38Q5R3I4 469 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 ZBTB41Q5SVQ8 909 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 DDX42Q86XP3 938 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMC6-207ENST00000448223 BBOF1Q8ND07 529 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 CLMNQ96JQ2 1002 aa9.95□□□□□ -0.82
SMC6-207ENST00000448223 PASKQ96RG2 1323 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 TRIM16O95361 564 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 EPB41P11171 864 aaKnown RBP9.94□□□□□ -0.82
SMC6-207ENST00000448223 CALML3P27482 149 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 EIF6P56537 245 aaKnown RBP9.94□□□□□ -0.82
SMC6-207ENST00000448223 CUL4BQ13620 913 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 C1orf146Q5VVC0 180 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 CASC4Q6P4E1 433 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 ZNF354CQ86Y25 554 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 GDAP1Q8TB36 358 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 CPVLQ9H3G5 476 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 FAM207AQ9NSI2 230 aaPredicted RBP9.94□□□□□ -0.82
SMC6-207ENST00000448223 UBN2Q6ZU65 1347 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 PLEKHA8P1O95397 391 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 SERPINB1P30740 379 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 STAT2P52630 851 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 SLC20A2Q08357 652 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 C2orf54Q08AI8 447 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 AP1B1Q10567 949 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 LIN9Q5TKA1 542 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 NCAPH2Q6IBW4 605 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 TMC5Q6UXY8 1006 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 CAPN12Q6ZSI9 719 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 USP33Q8TEY7 942 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 ZBED2Q9BTP6 218 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 PSD3Q9NYI0 1048 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 RGL1Q9NZL6 768 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 SNX5Q9Y5X3 404 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 PIK3C2AO00443 1686 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 NCAPD2Q15021 1401 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 PAX7P23759 505 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 LPIN2Q92539 896 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 TRIM11Q96F44 468 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 CD248Q9HCU0 757 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 RNF14Q9UBS8 474 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 POC1B-GALNT4F8VUJ3 575 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 F8W031 263 aaPredicted RBP9.94□□□□□ -0.82
SMC6-207ENST00000448223 PDE8AO60658 829 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 SERPINB10P48595 397 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 PLCD1P51178 756 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 PPARAQ07869 468 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 BIRC3Q13489 604 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 MED21Q13503 144 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 LETM2Q2VYF4 491 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 NELFBQ8WX92 580 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 TLK1Q9UKI8 766 aa9.94□□□□□ -0.82
SMC6-207ENST00000448223 RGPD8O14715 1765 aaPredicted RBP9.93□□□□□ -0.82
SMC6-207ENST00000448223 RHOBTB1O94844 696 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 SV2BQ7L1I2 683 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 NEK9Q8TD19 979 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 GSDMAQ96QA5 445 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 STRBPQ96SI9 672 aaKnown RBP9.93□□□□□ -0.82
SMC6-207ENST00000448223 UPF3AQ9H1J1 476 aaKnown RBP9.93□□□□□ -0.82
SMC6-207ENST00000448223 POLD4Q9HCU8 107 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMC6-207ENST00000448223 SYCE1LA8MT33 242 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 IKBKBO14920 756 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 CDR2Q01850 454 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 PLCB4Q15147 1175 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 GLE1Q53GS7 698 aaKnown RBP9.93□□□□□ -0.82
SMC6-207ENST00000448223 RINLQ6ZS11 566 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 ZSCAN29Q8IWY8 852 aaPredicted RBP9.93□□□□□ -0.82
SMC6-207ENST00000448223 NSMCE1Q8WV22 266 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 DNAJC9Q8WXX5 260 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 PIGBQ92521 554 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 CACNA1FO60840 1977 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 SRGAP2O75044 1071 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 SLCO1A2P46721 670 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 RGS9BPQ6ZS82 235 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 FOXP4Q8IVH2 680 aaPredicted RBP9.93□□□□□ -0.82
SMC6-207ENST00000448223 SIX5Q8N196 739 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 DDHD1Q8NEL9 900 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 ING2Q9H160 280 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 HEG1Q9ULI3 1381 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 A0A0U1RQJ8 604 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 AP1G2O75843 785 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 PCCAP05165 728 aaPredicted RBP9.93□□□□□ -0.82
SMC6-207ENST00000448223 FAM200BP0CF97 657 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 PYGBP11216 843 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 ATF2P15336 505 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 EHHADHQ08426 723 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 PPP2R5CQ13362 524 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 TRIM16LQ309B1 348 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 NLRP10Q86W26 655 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 RASSF3Q86WH2 238 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 TRIM55Q9BYV6 548 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 OLFML3Q9NRN5 406 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 CCDC87Q9NVE4 849 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 PDP2Q9P2J9 529 aa9.93□□□□□ -0.82
SMC6-207ENST00000448223 SOS2Q07890 1332 aaPredicted RBP9.93□□□□□ -0.82
SMC6-207ENST00000448223 GTPBP10A4D1E9 387 aaKnown RBP9.92□□□□□ -0.82
SMC6-207ENST00000448223 GOLGA8IPA6NC78 632 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms