RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SETD4Q9NVD3 440 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 TRPC6Q9Y210 931 aa13.47□□□□□ -0.25
RFC4-208ENST00000447345 RANBP2P49792 3224 aaKnown RBP13.46□□□□□ -0.25
RFC4-208ENST00000447345 RBAK-RBAKDNI3L0D1 243 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 MCM7P33993 719 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 STAT5BP51692 787 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 FPGSQ05932 587 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 PPFIA1Q13136 1202 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 FAM160B1Q5W0V3 765 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 SWSAP1Q6NVH7 229 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 ABHD15Q6UXT9 468 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 NOSTRINQ8IVI9 506 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 CKAP2LQ8IYA6 745 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 SMAP1Q8IYB5 467 aaPredicted RBP13.46□□□□□ -0.25
RFC4-208ENST00000447345 LMBR1Q8WVP7 490 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 ATP6V0A1Q93050 837 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 WNT8BQ93098 351 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 SCLYQ96I15 445 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 CTAGE1Q96RT6 745 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 RIT2Q99578 217 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 WNT8AQ9H1J5 351 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 FOXP1Q9H334 677 aaPredicted RBP13.46□□□□□ -0.25
RFC4-208ENST00000447345 ZNF302Q9NR11 478 aa13.46□□□□□ -0.25
RFC4-208ENST00000447345 WDR64B1ANS9 1081 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 TREHO43280 583 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 NEMFO60524 1076 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 PSMD10O75832 226 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 ATG7O95352 703 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 PSAPP07602 524 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 CSF2RAP15509 400 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 NBR1Q14596 966 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 PLCB4Q15147 1175 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 GRIK4Q16099 956 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 CALCRLQ16602 461 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 MFSD5Q6N075 450 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 PDXDC2PQ6P474 469 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 MIER3Q7Z3K6 550 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 TRAPPC12Q8WVT3 735 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 DHX38Q92620 1227 aaKnown RBP13.45□□□□□ -0.26
RFC4-208ENST00000447345 ZBTB10Q96DT7 871 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 KCNMB3Q9NPA1 279 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 DISC1Q9NRI5 854 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 GABBR1Q9UBS5 961 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 PCDHA10Q9Y5I2 948 aa13.45□□□□□ -0.26
RFC4-208ENST00000447345 IGSF9BQ9UPX0 1349 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 IGKV6D-21A0A0A0MT36 114 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 VPS37CA5D8V6 355 aaPredicted RBP13.44□□□□□ -0.26
RFC4-208ENST00000447345 ACRP10323 421 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 JAK3P52333 1124 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 EPHB4P54760 987 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 UGCGQ16739 394 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 TTC38Q5R3I4 469 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 LARP1BQ659C4 914 aaKnown RBP13.44□□□□□ -0.26
RFC4-208ENST00000447345 NCAPH2Q6IBW4 605 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 PLPPR4Q7Z2D5 763 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 TMEM199Q8N511 208 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 CCDC155Q8N6L0 562 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 HAS1Q92839 578 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 PRO3102Q9H379 93 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 VAV3Q9UKW4 847 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 NOL7Q9UMY1 257 aaKnown RBP13.44□□□□□ -0.26
RFC4-208ENST00000447345 PTPRSQ13332 1948 aa13.44□□□□□ -0.26
RFC4-208ENST00000447345 NRCAMQ92823 1304 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 CTSHP09668 335 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 GNAT1P11488 350 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 INSRRP14616 1297 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 U2AF2P26368 475 aaKnown RBP eCLIP13.43□□□□□ -0.264e-7■■□□□ 12.4
RFC4-208ENST00000447345 HOXC8P31273 242 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 SFNP31947 248 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 THPOP40225 353 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 PTK7Q13308 1070 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 BFSP2Q13515 415 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 ZNF174Q15697 407 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 C9orf50Q5SZB4 431 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 MICAL3Q7RTP6 2002 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 DEFB128Q7Z7B8 93 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 SERINC5Q86VE9 423 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 RETREG2Q8NC44 543 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 BANK1Q8NDB2 785 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 AFAP1L1Q8TED9 768 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 SNX21Q969T3 373 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 FAM20AQ96MK3 541 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 TMEM60Q9H2L4 133 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 TUBE1Q9UJT0 475 aa13.43□□□□□ -0.26
RFC4-208ENST00000447345 EML1O00423 815 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 TBX3O15119 743 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 BAG4O95429 457 aaKnown RBP13.42□□□□□ -0.26
RFC4-208ENST00000447345 HSP90AA1P07900 732 aaKnown RBP13.42□□□□□ -0.26
RFC4-208ENST00000447345 CKBP12277 381 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 ATP4AP20648 1035 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 BMP8BP34820 402 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 TXKP42681 527 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 SLC26A2P50443 739 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 PRKCEQ02156 737 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 PPIGQ13427 754 aaKnown RBP eCLIP13.42□□□□□ -0.263e-7■■□□□ 11.7
RFC4-208ENST00000447345 RUFY4Q6ZNE9 571 aa13.42□□□□□ -0.26
RFC4-208ENST00000447345 LRRC8DQ7L1W4 858 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms