RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 CCDC155Q8N6L0 562 aa13.78□□□□□ -0.2
SLC48A1-202ENST00000442892 RETREG2Q8NC44 543 aa13.78□□□□□ -0.2
SLC48A1-202ENST00000442892 ATP6V0A1Q93050 837 aa13.78□□□□□ -0.2
SLC48A1-202ENST00000442892 SCLYQ96I15 445 aa13.78□□□□□ -0.2
SLC48A1-202ENST00000442892 PCYT2Q99447 389 aa13.78□□□□□ -0.2
SLC48A1-202ENST00000442892 NOC4LQ9BVI4 516 aaKnown RBP13.78□□□□□ -0.2
SLC48A1-202ENST00000442892 FOXP1Q9H334 677 aaPredicted RBP13.78□□□□□ -0.2
SLC48A1-202ENST00000442892 RNPEPQ9H4A4 650 aa13.78□□□□□ -0.2
SLC48A1-202ENST00000442892 GABBR1Q9UBS5 961 aa13.78□□□□□ -0.2
SLC48A1-202ENST00000442892 NOL7Q9UMY1 257 aaKnown RBP13.78□□□□□ -0.2
SLC48A1-202ENST00000442892 EMSYQ7Z589 1322 aa13.78□□□□□ -0.2
SLC48A1-202ENST00000442892 TREHO43280 583 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 NEMFO60524 1076 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 LGR5O75473 907 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 GNAT1P11488 350 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 CUL4AQ13619 759 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 ZNF174Q15697 407 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 GRIK4Q16099 956 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 NCAPH2Q6IBW4 605 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 PPP4R3AQ6IN85 833 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 ABHD15Q6UXT9 468 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 SESTD1Q86VW0 696 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 NOSTRINQ8IVI9 506 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 SMAP1Q8IYB5 467 aaPredicted RBP13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 TMEM199Q8N511 208 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 SPRYD3Q8NCJ5 442 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 ETNPPLQ8TBG4 499 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 LMBR1Q8WVP7 490 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 MBOAT7Q96N66 472 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 RIT2Q99578 217 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 DISC1Q9NRI5 854 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 PCDHA10Q9Y5I2 948 aa13.77□□□□□ -0.21
SLC48A1-202ENST00000442892 POTEB3A0JP26 581 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 WNT7AO00755 349 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 ACRP10323 421 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 CSF2RAP15509 400 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 JAK3P52333 1124 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 BFSP2Q13515 415 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 HIC1Q14526 733 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 NBR1Q14596 966 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 TTC38Q5R3I4 469 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 MFSD5Q6N075 450 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 POTEBQ6S5H4 581 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 DEFB128Q7Z7B8 93 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 TRAPPC12Q8WVT3 735 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 GDF15Q99988 308 aa13.76□□□□□ -0.21
SLC48A1-202ENST00000442892 LOXHD1Q8IVV2 1947 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 PSMD10O75832 226 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 ATG7O95352 703 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 CTSHP09668 335 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 SFNP31947 248 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 THPOP40225 353 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 TXKP42681 527 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 PPIGQ13427 754 aaKnown RBP eCLIP13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 PLPPR4Q7Z2D5 763 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 SLFN12Q8IYM2 578 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 BANK1Q8NDB2 785 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 DHX38Q92620 1227 aaKnown RBP13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 ZBTB10Q96DT7 871 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 FAM20AQ96MK3 541 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 WNT8AQ9H1J5 351 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 KCNMB3Q9NPA1 279 aa13.75□□□□□ -0.21
SLC48A1-202ENST00000442892 NRCAMQ92823 1304 aa13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 INSRRP14616 1297 aa13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 PTK7Q13308 1070 aa13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 UGCGQ16739 394 aa13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 FERMT3Q86UX7 667 aa13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 CAGE1Q8TC20 777 aa13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 HAS1Q92839 578 aa13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 TNPO1Q92973 898 aaKnown RBP13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 WNT8BQ93098 351 aa13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 SNX21Q969T3 373 aa13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 CTAGE1Q96RT6 745 aa13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 FTOQ9C0B1 505 aaKnown RBP eCLIP13.74□□□□□ -0.212e-6■■□□□ 11.5
SLC48A1-202ENST00000442892 FAM49AQ9H0Q0 323 aaPredicted RBP13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 TUBE1Q9UJT0 475 aa13.74□□□□□ -0.21
SLC48A1-202ENST00000442892 TET1Q8NFU7 2136 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 IGKV6D-21A0A0A0MT36 114 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 RBAK-RBAKDNI3L0D1 243 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 EML1O00423 815 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 TBX3O15119 743 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 CKBP12277 381 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 PDCP20941 246 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 U2AF2P26368 475 aaKnown RBP eCLIP13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 SLC26A2P50443 739 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 EPHB4P54760 987 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 PRKCEQ02156 737 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 C9orf50Q5SZB4 431 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 RUFY4Q6ZNE9 571 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 LRRC8DQ7L1W4 858 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 SERINC5Q86VE9 423 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 TDHQ8IZJ6 230 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 AFAP1L1Q8TED9 768 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 ATP8B4Q8TF62 1192 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 RNPC3Q96LT9 517 aaKnown RBP13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 TMEM60Q9H2L4 133 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 SEPT9Q9UHD8 586 aaPredicted RBP13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 VAV3Q9UKW4 847 aa13.73□□□□□ -0.21
SLC48A1-202ENST00000442892 IGSF9BQ9UPX0 1349 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms