RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 UBE2Q1Q7Z7E8 422 aa8.54□□□□□ -1.04
COPS3-203ENST00000439936 TEX2Q8IWB9 1127 aa8.54□□□□□ -1.04
COPS3-203ENST00000439936 CCDC12Q8WUD4 166 aaPredicted RBP8.54□□□□□ -1.04
COPS3-203ENST00000439936 LENG1Q96BZ8 264 aaPredicted RBP8.54□□□□□ -1.04
COPS3-203ENST00000439936 PAWRQ96IZ0 340 aaKnown RBP8.54□□□□□ -1.04
COPS3-203ENST00000439936 TMX3Q96JJ7 454 aa8.54□□□□□ -1.04
COPS3-203ENST00000439936 PGBD1Q96JS3 809 aa8.54□□□□□ -1.04
COPS3-203ENST00000439936 XPNPEP3Q9NQH7 507 aa8.54□□□□□ -1.04
COPS3-203ENST00000439936 GJB4Q9NTQ9 266 aa8.54□□□□□ -1.04
COPS3-203ENST00000439936 RTEL1Q9NZ71 1219 aa8.54□□□□□ -1.04
COPS3-203ENST00000439936 SPDYE3A6NKU9 549 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 CTAGE5O15320 804 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 ADAMTS4O75173 837 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 ARIH2O95376 493 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 TXNP10599 105 aaKnown RBP8.53□□□□□ -1.04
COPS3-203ENST00000439936 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
COPS3-203ENST00000439936 VARSP26640 1264 aaKnown RBP8.53□□□□□ -1.04
COPS3-203ENST00000439936 CCND2P30279 289 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 MCM2P49736 904 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 GJA9P57773 515 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 LY6KQ17RY6 165 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 PCNX4Q63HM2 1172 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 ARMC2Q8NEN0 867 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 KLHDC9Q8NEP7 349 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 DIS3LQ8TF46 1054 aaKnown RBP8.53□□□□□ -1.04
COPS3-203ENST00000439936 SCFD2Q8WU76 684 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 COPS5Q92905 334 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 LLPHQ9BRT6 129 aaKnown RBP8.53□□□□□ -1.04
COPS3-203ENST00000439936 ALG1Q9BT22 464 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 ANO3Q9BYT9 981 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 UPF3AQ9H1J1 476 aaKnown RBP8.53□□□□□ -1.04
COPS3-203ENST00000439936 PRM3Q9NNZ6 103 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 KCNJ14Q9UNX9 436 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 Q9Y3F1 56 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 FRMPD4Q14CM0 1322 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 STK36Q9NRP7 1315 aa8.53□□□□□ -1.04
COPS3-203ENST00000439936 NKRFO15226 690 aaKnown RBP eCLIP8.52□□□□□ -1.05
COPS3-203ENST00000439936 EDIL3O43854 480 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 STAM2O75886 525 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 FARP2O94887 1054 aaPredicted RBP8.52□□□□□ -1.05
COPS3-203ENST00000439936 C6orf222P0C671 652 aaPredicted RBP8.52□□□□□ -1.05
COPS3-203ENST00000439936 TGFB3P10600 412 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 NKX3-2P78367 333 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 BEX3Q00994 111 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 SP2Q02086 613 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 TTLL4Q14679 1199 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 NPY5RQ15761 445 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 KCNA10Q16322 511 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 GNASQ5JWF2 1037 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 MCTP2Q6DN12 878 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 CCSAPQ6IQ19 270 aaPredicted RBP8.52□□□□□ -1.05
COPS3-203ENST00000439936 XRRA1Q6P2D8 792 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 NECAB2Q7Z6G3 386 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 BLIDQ8IZY5 108 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 FAM177A1Q8N128 213 aaPredicted RBP8.52□□□□□ -1.05
COPS3-203ENST00000439936 CCDC148Q8NFR7 591 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 BICD2Q8TD16 824 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 RASGRP4Q8TDF6 673 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 WASF1Q92558 559 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 INPP4AQ96PE3 977 aaPredicted RBP8.52□□□□□ -1.05
COPS3-203ENST00000439936 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 PHF20Q9BVI0 1012 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 SENP6Q9GZR1 1112 aaPredicted RBP8.52□□□□□ -1.05
COPS3-203ENST00000439936 AP5M1Q9H0R1 490 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 BCAS3Q9H6U6 928 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 DDX41Q9UJV9 622 aaKnown RBP8.52□□□□□ -1.05
COPS3-203ENST00000439936 PCDHA4Q9UN74 947 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 UBIAD1Q9Y5Z9 338 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 LRRC37A2A6NM11 1700 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 DOCK5Q9H7D0 1870 aa8.52□□□□□ -1.05
COPS3-203ENST00000439936 MYADML2A6NDP7 307 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 SPATA31C2B4DYI2 1134 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 KBTBD13C9JR72 458 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 M0R2N6 131 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 DNM1LO00429 736 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 COL6A1P12109 1028 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 XBP1P17861 261 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 ITGB5P18084 799 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 ICAM3P32942 547 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 SREBF1P36956 1147 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 SEMA3FQ13275 785 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 AP3B2Q13367 1082 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 GALNT17Q6IS24 598 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 KCNV1Q6PIU1 500 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 RNF180Q86T96 592 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 TLK2Q86UE8 772 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 DHX37Q8IY37 1157 aaKnown RBP8.51□□□□□ -1.05
COPS3-203ENST00000439936 REXO1Q8N1G1 1221 aaKnown RBP8.51□□□□□ -1.05
COPS3-203ENST00000439936 CYP2W1Q8TAV3 490 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 CRYGNQ8WXF5 182 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 FERMT2Q96AC1 680 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 MXRA8Q9BRK3 442 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 TSEN34Q9BSV6 310 aaKnown RBP8.51□□□□□ -1.05
COPS3-203ENST00000439936 EHMT1Q9H9B1 1298 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 SPC25Q9HBM1 224 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 JADE2Q9NQC1 790 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 SYNRGQ9UMZ2 1314 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 MRVI1Q9Y6F6 885 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 BRCA2P51587 3418 aa8.51□□□□□ -1.05
COPS3-203ENST00000439936 MEIS1O00470 390 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms