RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 CRY1Q16526 586 aa7.23□□□□□ -1.25
PTPN4-204ENST00000431283 FAM47CQ5HY64 1035 aa7.23□□□□□ -1.25
PTPN4-204ENST00000431283 ZNF585AQ6P3V2 769 aa7.23□□□□□ -1.25
PTPN4-204ENST00000431283 WDR48Q8TAF3 677 aa7.23□□□□□ -1.25
PTPN4-204ENST00000431283 SH3RF3Q8TEJ3 882 aaPredicted RBP7.23□□□□□ -1.25
PTPN4-204ENST00000431283 HIRIP3Q9BW71 556 aaPredicted RBP7.23□□□□□ -1.25
PTPN4-204ENST00000431283 SLC39A2Q9NP94 309 aa7.23□□□□□ -1.25
PTPN4-204ENST00000431283 KCND1Q9NSA2 647 aa7.23□□□□□ -1.25
PTPN4-204ENST00000431283 SRPK3Q9UPE1 567 aa7.23□□□□□ -1.25
PTPN4-204ENST00000431283 TSC22D4Q9Y3Q8 395 aa7.23□□□□□ -1.25
PTPN4-204ENST00000431283 PCDHA8Q9Y5H6 950 aa7.23□□□□□ -1.25
PTPN4-204ENST00000431283 ATP23Q9Y6H3 246 aa7.23□□□□□ -1.25
PTPN4-204ENST00000431283 MATN3O15232 486 aa7.22□□□□□ -1.25
PTPN4-204ENST00000431283 GPR42O15529 346 aa7.22□□□□□ -1.25
PTPN4-204ENST00000431283 SRGAP2CP0DJJ0 459 aa7.22□□□□□ -1.25
PTPN4-204ENST00000431283 PTPN1P18031 435 aaKnown RBP7.22□□□□□ -1.25
PTPN4-204ENST00000431283 GTF2F1P35269 517 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTPN4-204ENST00000431283 GABREP78334 506 aa7.22□□□□□ -1.25
PTPN4-204ENST00000431283 DBPQ10586 325 aaPredicted RBP7.22□□□□□ -1.25
PTPN4-204ENST00000431283 USP10Q14694 798 aaKnown RBP7.22□□□□□ -1.25
PTPN4-204ENST00000431283 FAM209AQ5JX71 171 aa7.22□□□□□ -1.25
PTPN4-204ENST00000431283 GPR155Q7Z3F1 870 aa7.22□□□□□ -1.25
PTPN4-204ENST00000431283 AJUBAQ96IF1 538 aa7.22□□□□□ -1.25
PTPN4-204ENST00000431283 LMF1Q96S06 567 aa7.22□□□□□ -1.25
PTPN4-204ENST00000431283 KRTAP3-1Q9BYR8 98 aa7.22□□□□□ -1.25
PTPN4-204ENST00000431283 SEC61A2Q9H9S3 476 aa7.22□□□□□ -1.25
PTPN4-204ENST00000431283 IGSF5Q9NSI5 407 aa7.22□□□□□ -1.25
PTPN4-204ENST00000431283 ACOT7O00154 380 aa7.21□□□□□ -1.26
PTPN4-204ENST00000431283 ADCY3O60266 1144 aa7.21□□□□□ -1.26
PTPN4-204ENST00000431283 CUTAO60888 179 aa7.21□□□□□ -1.26
PTPN4-204ENST00000431283 PDE6AP16499 860 aa7.21□□□□□ -1.26
PTPN4-204ENST00000431283 ZC3H7AQ8IWR0 971 aaKnown RBP7.21□□□□□ -1.26
PTPN4-204ENST00000431283 GIMAP8Q8ND71 665 aaPredicted RBP7.21□□□□□ -1.26
PTPN4-204ENST00000431283 LRRC37BQ96QE4 947 aa7.21□□□□□ -1.26
PTPN4-204ENST00000431283 CARD11Q9BXL7 1154 aa7.21□□□□□ -1.26
PTPN4-204ENST00000431283 SEMA4AQ9H3S1 761 aa7.21□□□□□ -1.26
PTPN4-204ENST00000431283 CSF2RBP32927 897 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 SELENOPP49908 381 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 DNM2P50570 870 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 WDR72Q3MJ13 1102 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 FIGNQ5HY92 759 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 C16orf59Q7L2K0 433 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 PTRH1Q86Y79 214 aaKnown RBP7.2□□□□□ -1.26
PTPN4-204ENST00000431283 PALM2Q8IXS6 379 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 PCDH19Q8TAB3 1148 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 PTPN18Q99952 460 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 DHRS4Q9BTZ2 278 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 SRRDQ9UH36 339 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 SLC4A7Q9Y6M7 1214 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 KDM2BQ8NHM5 1336 aa7.2□□□□□ -1.26
PTPN4-204ENST00000431283 ESYT3A0FGR9 886 aa7.19□□□□□ -1.26
PTPN4-204ENST00000431283 PRAMEF25A6NGN4 478 aa7.19□□□□□ -1.26
PTPN4-204ENST00000431283 WNT9AO14904 365 aa7.19□□□□□ -1.26
PTPN4-204ENST00000431283 ZNF623O75123 536 aa7.19□□□□□ -1.26
PTPN4-204ENST00000431283 PYGMP11217 842 aa7.19□□□□□ -1.26
PTPN4-204ENST00000431283 POLD1P28340 1107 aa7.19□□□□□ -1.26
PTPN4-204ENST00000431283 OSTM1Q86WC4 334 aa7.19□□□□□ -1.26
PTPN4-204ENST00000431283 SH3RF2Q8TEC5 729 aa7.19□□□□□ -1.26
PTPN4-204ENST00000431283 TCRBV5S4A2TA0A5A2 114 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 CCDC66A2RUB6 948 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 PATE3B3GLJ2 98 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 ARVCFO00192 962 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 MUSKO15146 869 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 DIAPH1O60610 1272 aaKnown RBP7.18□□□□□ -1.26
PTPN4-204ENST00000431283 CNOT4O95628 575 aaKnown RBP7.18□□□□□ -1.26
PTPN4-204ENST00000431283 IL18BPO95998 194 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 FSHBP01225 129 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 RAC3P60763 192 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 LONRF2Q1L5Z9 754 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 ZC3H12BQ5HYM0 836 aaKnown RBP7.18□□□□□ -1.26
PTPN4-204ENST00000431283 SPRED1Q7Z699 444 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 DNERQ8NFT8 737 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 KATNBL1Q9H079 304 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 MEGF9Q9H1U4 602 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 CD248Q9HCU0 757 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 PCDHA9Q9Y5H5 950 aa7.18□□□□□ -1.26
PTPN4-204ENST00000431283 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.17□□□□□ -1.26
PTPN4-204ENST00000431283 FAM90A27PA6NNH2 459 aa7.17□□□□□ -1.26
PTPN4-204ENST00000431283 MAN2B1O00754 1011 aa7.17□□□□□ -1.26
PTPN4-204ENST00000431283 CRTAMO95727 393 aa7.17□□□□□ -1.26
PTPN4-204ENST00000431283 FAM153BP0C7A2 387 aa7.17□□□□□ -1.26
PTPN4-204ENST00000431283 PTGS1P23219 599 aa7.17□□□□□ -1.26
PTPN4-204ENST00000431283 ZMAT1Q5H9K5 638 aa7.17□□□□□ -1.26
PTPN4-204ENST00000431283 USP51Q70EK9 711 aa7.17□□□□□ -1.26
PTPN4-204ENST00000431283 GNRHR2Q96P88 292 aa7.17□□□□□ -1.26
PTPN4-204ENST00000431283 INCENPQ9NQS7 918 aa7.17□□□□□ -1.26
PTPN4-204ENST00000431283 NDOR1Q9UHB4 597 aa7.17□□□□□ -1.26
PTPN4-204ENST00000431283 FBXO10Q9UK96 956 aa7.17□□□□□ -1.26
PTPN4-204ENST00000431283 MRPS23Q9Y3D9 190 aaKnown RBP7.17□□□□□ -1.26
PTPN4-204ENST00000431283 EFCAB14O75071 495 aa7.16□□□□□ -1.26
PTPN4-204ENST00000431283 C6P13671 934 aa7.16□□□□□ -1.26
PTPN4-204ENST00000431283 GDF5P43026 501 aa7.16□□□□□ -1.26
PTPN4-204ENST00000431283 JAM2P57087 298 aa7.16□□□□□ -1.26
PTPN4-204ENST00000431283 FOXB2Q5VYV0 432 aa7.16□□□□□ -1.26
PTPN4-204ENST00000431283 LRP10Q7Z4F1 713 aa7.16□□□□□ -1.26
PTPN4-204ENST00000431283 NEIL1Q96FI4 390 aaPredicted RBP7.16□□□□□ -1.26
PTPN4-204ENST00000431283 SCYL1Q96KG9 808 aa7.16□□□□□ -1.26
PTPN4-204ENST00000431283 EXOC2Q96KP1 924 aa7.16□□□□□ -1.26
PTPN4-204ENST00000431283 DEPDC7Q96QD5 511 aa7.16□□□□□ -1.26
PTPN4-204ENST00000431283 CBLCQ9ULV8 474 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms