RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 BATF3Q9NR55 127 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 STK17AQ9UEE5 414 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 INPP5FQ9Y2H2 1132 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 CSPG5O95196 566 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 PYGBP11216 843 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 TCP10Q12799 353 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 CYTH1Q15438 398 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 PCGF5Q86SE9 256 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 SH2D3CQ8N5H7 860 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 COG1Q8WTW3 980 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 CFAP69A5D8W1 941 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 PODXLO00592 558 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 DIS3Q9Y2L1 958 aaKnown RBP17.37■□□□□ 0.37
SHANK1-204ENST00000391814 ANGPTL3Q9Y5C1 460 aa17.37■□□□□ 0.37
SHANK1-204ENST00000391814 ABL1P00519 1130 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 ZBTB10Q96DT7 871 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 KDM5DQ9BY66 1539 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 TEX14Q8IWB6 1497 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 TRIM49BA6NDI0 452 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 LAD1O00515 517 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 MRPS15P82914 257 aaKnown RBP17.36■□□□□ 0.37
SHANK1-204ENST00000391814 CPXCR1Q8N123 301 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 PNMA1Q8ND90 353 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 SNRNP27Q8WVK2 155 aaKnown RBP17.36■□□□□ 0.37
SHANK1-204ENST00000391814 SEC24DO94855 1032 aaPredicted RBP17.36■□□□□ 0.37
SHANK1-204ENST00000391814 PLCB4Q15147 1175 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 ARL8AQ96BM9 186 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 TAF1DQ9H5J8 278 aaPredicted RBP17.36■□□□□ 0.37
SHANK1-204ENST00000391814 SNX5Q9Y5X3 404 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 HOXB7P09629 217 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 RASSF3Q86WH2 238 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 TRMT2AQ8IZ69 625 aaKnown RBP17.36■□□□□ 0.37
SHANK1-204ENST00000391814 HPCAL4Q9UM19 191 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 TCP11X1B4DZS4 312 aa17.36■□□□□ 0.37
SHANK1-204ENST00000391814 UBTFL6P0CB48 400 aaPredicted RBP17.36■□□□□ 0.37
SHANK1-204ENST00000391814 HSPA8P11142 646 aaKnown RBP17.36■□□□□ 0.37
SHANK1-204ENST00000391814 KLRF2D3W0D1 207 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 DDIT3P35638 169 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 ARFIP2P53365 341 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 PABPC4Q13310 644 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHANK1-204ENST00000391814 FBXL5Q9UKA1 691 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 PZPP20742 1482 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 TARSL2A2RTX5 802 aaKnown RBP17.35■□□□□ 0.37
SHANK1-204ENST00000391814 POLR2BP30876 1174 aaKnown RBP17.35■□□□□ 0.37
SHANK1-204ENST00000391814 FSCBQ5H9T9 825 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 HABP4Q5JVS0 413 aaKnown RBP17.35■□□□□ 0.37
SHANK1-204ENST00000391814 NSMFQ6X4W1 530 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 ATP6V1E2Q96A05 226 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 OSBPL3Q9H4L5 887 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 PCDH11XQ9BZA7 1347 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 PCDH11YQ9BZA8 1340 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 CCDC188H7C350 402 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 TOM1O60784 492 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 TRIM67Q6ZTA4 783 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 EIF4A1P60842 406 aaKnown RBP17.35■□□□□ 0.37
SHANK1-204ENST00000391814 LRRC24Q50LG9 513 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 WDR7Q9Y4E6 1490 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 IL2RBP14784 551 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 CORO7P57737 925 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 CABLES1Q8TDN4 633 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 SEC16BQ96JE7 1060 aa17.35■□□□□ 0.37
SHANK1-204ENST00000391814 GRID2IPA4D2P6 1211 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 CASP1P29466 404 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 HSPH1Q92598 858 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 AIFM3Q96NN9 605 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 ZWILCHQ9H900 591 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 KRT75O95678 551 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 PDE6AP16499 860 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 ARHGDIAP52565 204 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 OCRLQ01968 901 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 LRRC36Q1X8D7 754 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 GJC2Q5T442 439 aaPredicted RBP17.34■□□□□ 0.37
SHANK1-204ENST00000391814 DPP8Q6V1X1 898 aaPredicted RBP17.34■□□□□ 0.37
SHANK1-204ENST00000391814 CCT8L2Q96SF2 557 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 TEKT3Q9BXF9 490 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 A1BGP04217 495 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 PLCG1P19174 1290 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 ODR4Q5SWX8 454 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 APOA5Q6Q788 366 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 STAMBPL1Q96FJ0 436 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 ASCC2Q9H1I8 757 aaPredicted RBP17.34■□□□□ 0.37
SHANK1-204ENST00000391814 PHF20L1A8MW92 1017 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 MEIS1O00470 390 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 CHN1P15882 459 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 HDAC4P56524 1084 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 MYLK4Q86YV6 388 aaPredicted RBP17.34■□□□□ 0.37
SHANK1-204ENST00000391814 DNAAF3Q8N9W5 541 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 FAF2Q96CS3 445 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 EHD2Q9NZN4 543 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 PLXNC1O60486 1568 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 LRRC53A6NM62 1247 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 YWHAHQ04917 246 aaPredicted RBP17.34■□□□□ 0.37
SHANK1-204ENST00000391814 KLC1Q07866 573 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 THOC5Q13769 683 aaKnown RBP17.34■□□□□ 0.37
SHANK1-204ENST00000391814 MUM1L1Q5H9M0 696 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 SPATA21Q7Z572 469 aa17.34■□□□□ 0.37
SHANK1-204ENST00000391814 PI4K2BG5E9Z4 385 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 LPXNO60711 386 aa17.33■□□□□ 0.37
SHANK1-204ENST00000391814 OATP04181 439 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms