RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 GGA2Q9UJY4 613 aa18.21■□□□□ 0.51
PCDHA1-201ENST00000378133 PCDHA12Q9UN75 941 aa18.21■□□□□ 0.51
PCDHA1-201ENST00000378133 DAGLAQ9Y4D2 1042 aa18.21■□□□□ 0.51
PCDHA1-201ENST00000378133 GAKO14976 1311 aa18.21■□□□□ 0.51
PCDHA1-201ENST00000378133 PNMA6FA0A0J9YX94 578 aa18.21■□□□□ 0.5
PCDHA1-201ENST00000378133 F8W031 263 aaPredicted RBP18.21■□□□□ 0.5
PCDHA1-201ENST00000378133 RASSF9O75901 435 aa18.21■□□□□ 0.5
PCDHA1-201ENST00000378133 SNHG28P0DPA3 235 aa18.21■□□□□ 0.5
PCDHA1-201ENST00000378133 DNA2P51530 1060 aa18.21■□□□□ 0.5
PCDHA1-201ENST00000378133 CDR1P51861 262 aa18.21■□□□□ 0.5
PCDHA1-201ENST00000378133 NEDD9Q14511 834 aa18.21■□□□□ 0.5
PCDHA1-201ENST00000378133 PLCB4Q15147 1175 aa18.21■□□□□ 0.5
PCDHA1-201ENST00000378133 PROM2Q8N271 834 aa18.21■□□□□ 0.5
PCDHA1-201ENST00000378133 NOL4O94818 638 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 CLSTN1O94985 981 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 HPDP32754 393 aaPredicted RBP18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 CACNB1Q02641 598 aaPredicted RBP18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 ITGB3BPQ13352 177 aaPredicted RBP18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 ZCWPW2Q504Y3 356 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 FAM26FQ5R3K3 315 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 CEP85LQ5SZL2 805 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 FAM83BQ5T0W9 1011 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 RNF10Q8N5U6 811 aaKnown RBP18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 KRT12Q99456 494 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 SSU72P8A0A1W2PR75 194 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 E9PMD0 336 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 KIF1CO43896 1103 aaKnown RBP18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 TLR2O60603 784 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 POLR2FP61218 127 aaKnown RBP18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 GTF2IP78347 998 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 GABPAQ06546 454 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 ZNF543Q08ER8 600 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 SLC9C1Q4G0N8 1177 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 WHAMMQ8TF30 809 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 CASKIN2Q8WXE0 1202 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 EDEM3Q9BZQ6 932 aa18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 RGS17Q9UGC6 210 aaPredicted RBP18.2■□□□□ 0.5
PCDHA1-201ENST00000378133 NPHP3-ACAD11A0A0J9YXS1 232 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 GOLGA6L10A6NI86 522 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 C6orf229H3BNL8 230 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 CLK2P49760 499 aaKnown RBP18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 C6orf89Q6UWU4 347 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 CCDC121Q6ZUS5 278 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 C1orf131Q8NDD1 294 aaKnown RBP18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 CCDC114Q96M63 670 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 LSM14BQ9BX40 385 aaKnown RBP18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 SLC40A1Q9NP59 571 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 BMP2KQ9NSY1 1161 aaPredicted RBP18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 KIAA1024Q9UPX6 916 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 PLAAQ9Y263 795 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 TTLL1O95922 423 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 ARID5AQ03989 594 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 TRADDQ15628 312 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 ENOX2Q16206 610 aaKnown RBP18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 SFMBT2Q5VUG0 894 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 KCTD1Q719H9 257 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 TBC1D16Q8TBP0 767 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 CUL5Q93034 780 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 DDX4Q9NQI0 724 aaKnown RBP18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 CEP72Q9P209 647 aa18.19■□□□□ 0.5
PCDHA1-201ENST00000378133 USP17L10C9JJH3 530 aa18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 DRP2Q13474 957 aa18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 TBC1D22AQ8WUA7 517 aa18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 CYFIP2Q96F07 1278 aa18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 IGKV6D-41A0A0C4DH26 115 aa18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 MRPL12P52815 198 aaKnown RBP18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 RNASE9P60153 205 aaKnown RBP18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 PPARDQ03181 441 aa18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 PREPLQ4J6C6 727 aaPredicted RBP18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 GRIPAP1Q4V328 841 aa18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 ARFGAP2Q8N6H7 521 aa18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 PSTPIP2Q9H939 334 aa18.18■□□□□ 0.5
PCDHA1-201ENST00000378133 SRRM3A6NNA2 597 aaPredicted RBP18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 SERPING1P05155 500 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 SLURP2P0DP57 97 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 RXRBP28702 533 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 HERC4Q5GLZ8 1057 aaPredicted RBP18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 TBC1D5Q92609 795 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 TMBIM4Q9HC24 238 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 MCM8Q9UJA3 840 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 MYH7BA7E2Y1 1941 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 GOLGA6L7A0A1B0GV03 622 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 CCDC189A1A4V9 331 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 RIMBP2O15034 1052 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 C21orf2O43822 256 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 PALMO75781 387 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 NF2P35240 595 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 CDC37Q16543 378 aaPredicted RBP18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 CRY2Q49AN0 593 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 PLIN4Q96Q06 1357 aa18.17■□□□□ 0.5
PCDHA1-201ENST00000378133 USP17L15C9J2P7 530 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 USP17L13C9JLJ4 530 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 USP17L11C9JVI0 530 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 USP17L18D6R9N7 530 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 USP17L22D6RA61 530 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 USP17L17D6RBQ6 530 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 USP17L19D6RCP7 530 aa18.16■□□□□ 0.5
PCDHA1-201ENST00000378133 USP17L20D6RJB6 530 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms