RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 UTP6Q9NYH9 597 aaKnown RBP9.7□□□□□ -0.86
ATG4A-203ENST00000372232 FAM184BQ9ULE4 1060 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 MYO5AQ9Y4I1 1855 aaKnown RBP9.7□□□□□ -0.86
ATG4A-203ENST00000372232 ZNF804BA4D1E1 1349 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 TMEM232C9JQI7 657 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 ZNF189O75820 626 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-203ENST00000372232 SERPINC1P01008 464 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 POLR3DP05423 398 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-203ENST00000372232 DESP17661 470 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 LIFRP42702 1097 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 PSMC4P43686 418 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 KCNQ4P56696 695 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 SGSM1Q2NKQ1 1148 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 ALS2CLQ60I27 953 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 LCA5Q86VQ0 697 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 EXOC8Q8IYI6 725 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 FMR1NBQ8N0W7 255 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-203ENST00000372232 SLC35F6Q8N357 371 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 SMYD1Q8NB12 490 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 PHC3Q8NDX5 983 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 RNPC3Q96LT9 517 aaKnown RBP9.7□□□□□ -0.86
ATG4A-203ENST00000372232 RMDN2Q96LZ7 410 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 NACAP1Q9BZK3 213 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 CNNM2Q9H8M5 875 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 LZTFL1Q9NQ48 299 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 ZSWIM5Q9P217 1185 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 LRP2BPQ9P2M1 347 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 ATXN10Q9UBB4 475 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 HDAC6Q9UBN7 1215 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 PCDHA7Q9UN72 937 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 L3MBTL1Q9Y468 752 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 TACC3Q9Y6A5 838 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 F8VZ95 297 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 ZBTB43O43298 467 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 FZD6O60353 706 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 CTSHP09668 335 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 RXRAP19793 462 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 CDC27P30260 824 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 MXRA7P84157 204 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 KIF23Q02241 960 aaPredicted RBP9.69□□□□□ -0.86
ATG4A-203ENST00000372232 PTPRNQ16849 979 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 TMEM67Q5HYA8 995 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 ADALQ6DHV7 355 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 CCDC80Q76M96 950 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 EHBP1Q8NDI1 1231 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 HDAC7Q8WUI4 952 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 MAIP1Q8WWC4 291 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 ARL8AQ96BM9 186 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 RPGRIP1Q96KN7 1286 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 MTRQ99707 1265 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 ARHGAP9Q9BRR9 750 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 NDST4Q9H3R1 872 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 PIDD1Q9HB75 910 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 INTS13Q9NVM9 706 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 GPSM3Q9Y4H4 160 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 SLC4A4Q9Y6R1 1079 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 CNTNAP4Q9C0A0 1308 aa9.69□□□□□ -0.86
ATG4A-203ENST00000372232 A0A1W2PQ27 194 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 A0A1W2PQ64 194 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 A0A1W2PQD8 194 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 WTIPA6NIX2 430 aaPredicted RBP9.68□□□□□ -0.86
ATG4A-203ENST00000372232 KIF28PB7ZC32 967 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 DIAPH2O60879 1101 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 RXRBP28702 533 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 UBE4AQ14139 1066 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 SLC10A5Q5PT55 438 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 MFSD6Q6ZSS7 791 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 MICU3Q86XE3 530 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 GBP7Q8N8V2 638 aaPredicted RBP9.68□□□□□ -0.86
ATG4A-203ENST00000372232 FSIP1Q8NA03 581 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 KCNG4Q8TDN1 519 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 ALG1Q9BT22 464 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 KRT23Q9C075 422 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 TRPV5Q9NQA5 729 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 TMCO1Q9UM00 188 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 CLIC4Q9Y696 253 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 COL4A1P02462 1669 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 IFIT3O14879 490 aaKnown RBP9.68□□□□□ -0.86
ATG4A-203ENST00000372232 N4BP3O15049 544 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 PPIP5K2O43314 1243 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 YEATS4O95619 227 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 VCAM1P19320 739 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 GYG1P46976 350 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 EIF1AXP47813 144 aaKnown RBP9.68□□□□□ -0.86
ATG4A-203ENST00000372232 PRPF4BQ13523 1007 aaKnown RBP9.68□□□□□ -0.86
ATG4A-203ENST00000372232 NTRK3Q16288 839 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 Q3C1V9 767 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 KBTBD12Q3ZCT8 623 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 TBC1D9BQ66K14 1250 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 PTF1AQ7RTS3 328 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 ADGRA1Q86SQ6 560 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 ARL10Q8N8L6 244 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 MIGA1Q8NAN2 632 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 RUBCNQ92622 972 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 GDAP1L1Q96MZ0 367 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 AIFM3Q96NN9 605 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 ZBED2Q9BTP6 218 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 GALNT8Q9NY28 637 aa9.68□□□□□ -0.86
ATG4A-203ENST00000372232 AATFQ9NY61 560 aaKnown RBP eCLIP9.68□□□□□ -0.866e-7■■■■■ 46.9
ATG4A-203ENST00000372232 MINPP1Q9UNW1 487 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms