RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 GPKOWQ92917 476 aaPredicted RBP eCLIP12.82□□□□□ -0.362e-8■■□□□ 11.7
H3F3A-203ENST00000366815 TIFAQ96CG3 184 aa12.82□□□□□ -0.36
H3F3A-203ENST00000366815 RRP36Q96EU6 259 aaKnown RBP12.82□□□□□ -0.36
H3F3A-203ENST00000366815 LRRC2Q9BYS8 371 aa12.82□□□□□ -0.36
H3F3A-203ENST00000366815 MTIF3Q9H2K0 278 aaKnown RBP12.82□□□□□ -0.36
H3F3A-203ENST00000366815 ZNF576Q9H609 170 aa12.82□□□□□ -0.36
H3F3A-203ENST00000366815 PIK3CDO00329 1044 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 MEIS2O14770 477 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 GGPS1O95749 300 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 AVPP01185 164 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 PFKMP08237 780 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 IQCF3P0C7M6 154 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 ZNF286BP0CG31 522 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 CALM1P0DP23 149 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 CALM2P0DP24 149 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 CALM3P0DP25 149 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 CHMP4BP1P59074 171 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 GRIN2CQ14957 1233 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 HSDL1Q3SXM5 330 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 CMTR1Q8N1G2 835 aaKnown RBP12.81□□□□□ -0.36
H3F3A-203ENST00000366815 CRIPAKQ8N1N5 446 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 INPP4AQ96PE3 977 aaPredicted RBP12.81□□□□□ -0.36
H3F3A-203ENST00000366815 GTF2IRD1Q9UHL9 959 aa12.81□□□□□ -0.36
H3F3A-203ENST00000366815 UNC80Q8N2C7 3258 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 PTPRSQ13332 1948 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 PPFIA4O75335 1185 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 CDC45O75419 566 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 STAM2O75886 525 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 ICAM3P32942 547 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 RFC2P35250 354 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 EXOSC10Q01780 885 aaKnown RBP12.8□□□□□ -0.36
H3F3A-203ENST00000366815 RBL2Q08999 1139 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 SEMA3FQ13275 785 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 BFSP2Q13515 415 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 PTGISQ16647 500 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 PTPRNQ16849 979 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 TSGA10IPQ3SY00 556 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 TMEM259Q4ZIN3 620 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 RNF20Q5VTR2 975 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 USP17L6PQ6QN14 398 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 TMTC3Q6ZXV5 915 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 RAB11FIP4Q86YS3 637 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 MAFAQ8NHW3 353 aaPredicted RBP12.8□□□□□ -0.36
H3F3A-203ENST00000366815 DHX38Q92620 1227 aaKnown RBP12.8□□□□□ -0.36
H3F3A-203ENST00000366815 KATNAL1Q9BW62 490 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 BCAS3Q9H6U6 928 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 HDAC6Q9UBN7 1215 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 SEC63Q9UGP8 760 aaKnown RBP12.8□□□□□ -0.36
H3F3A-203ENST00000366815 SLC12A7Q9Y666 1083 aa12.8□□□□□ -0.36
H3F3A-203ENST00000366815 A0A0C4DFX4 3053 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 SPATA31C2B4DYI2 1134 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 SORBS3O60504 671 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 FOSL2P15408 326 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 RAB30Q15771 203 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 KIAA0753Q2KHM9 967 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 GNPTABQ3T906 1256 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 APOA5Q6Q788 366 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 DEFB128Q7Z7B8 93 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 MICU3Q86XE3 530 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 FANCBQ8NB91 859 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 CAGE1Q8TC20 777 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 AFAP1L1Q8TED9 768 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 SPATA33Q96N06 139 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 NEK1Q96PY6 1258 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 C16orf70Q9BSU1 422 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 ALG1Q9BT22 464 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 DACH1Q9UI36 760 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 NOD1Q9Y239 953 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 YBX2Q9Y2T7 364 aaKnown RBP12.79□□□□□ -0.36
H3F3A-203ENST00000366815 SLC4A7Q9Y6M7 1214 aa12.79□□□□□ -0.36
H3F3A-203ENST00000366815 GPNMBQ14956 572 aa12.78□□□□□ -0.36
H3F3A-203ENST00000366815 CTC1Q2NKJ3 1217 aa12.78□□□□□ -0.36
H3F3A-203ENST00000366815 PCNX4Q63HM2 1172 aa12.78□□□□□ -0.36
H3F3A-203ENST00000366815 DHX32Q7L7V1 743 aaKnown RBP12.78□□□□□ -0.36
H3F3A-203ENST00000366815 C7orf31Q8N865 590 aa12.78□□□□□ -0.36
H3F3A-203ENST00000366815 RETREG2Q8NC44 543 aa12.78□□□□□ -0.36
H3F3A-203ENST00000366815 CUL5Q93034 780 aa12.78□□□□□ -0.36
H3F3A-203ENST00000366815 TCEANC2Q96MN5 208 aa12.78□□□□□ -0.36
H3F3A-203ENST00000366815 MSRAQ9UJ68 235 aa12.78□□□□□ -0.36
H3F3A-203ENST00000366815 MYO9BQ13459 2157 aa12.78□□□□□ -0.36
H3F3A-203ENST00000366815 CNTNAP5Q8WYK1 1306 aa12.78□□□□□ -0.36
H3F3A-203ENST00000366815 CHD7Q9P2D1 2997 aa12.78□□□□□ -0.36
H3F3A-203ENST00000366815 PRUNE2Q8WUY3 3088 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 CUL9Q8IWT3 2517 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 hCG_1642624A0A1W2PR95 340 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 ZBBXA8MT70 800 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 WNT7AO00755 349 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 FIBPO43427 364 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 AP1G2O75843 785 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 SELPP16109 830 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 HOXC8P31273 242 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 RABGGTBP53611 331 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 TRIM71Q2Q1W2 868 aaKnown RBP12.77□□□□□ -0.37
H3F3A-203ENST00000366815 XRRA1Q6P2D8 792 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 METTL7BQ6UX53 244 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 LRRC8DQ7L1W4 858 aa12.77□□□□□ -0.37
H3F3A-203ENST00000366815 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.77□□□□□ -0.37
H3F3A-203ENST00000366815 CCDC82Q8N4S0 544 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms