RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 MAGEA1P43355 309 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 CARSP49589 748 aaKnown RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 FAM193AP78312 1265 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 KRT83P78385 493 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 KIF5AQ12840 1032 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 ADAM9Q13443 819 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 CERKLQ49MI3 558 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 UBAP2Q5T6F2 1119 aaKnown RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 NOC3LQ8WTT2 800 aaKnown RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 MKL1Q969V6 931 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 CCDC102AQ96A19 550 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 CDK5RAP3Q96JB5 506 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 ZDHHC15Q96MV8 337 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 DHX36Q9H2U1 1008 aaKnown RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 MAGEF1Q9HAY2 307 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 NR2E1Q9Y466 385 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 CYP3A7-CYP3A51PA0A087WV96 503 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 GRID2IPA4D2P6 1211 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 TULP2O00295 520 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 CYP3A7P24462 503 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 NMT1P30419 496 aaKnown RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 CYLC1P35663 651 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 RBM5P52756 815 aaKnown RBP eCLIP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 AMPD3Q01432 767 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 HHIPL2Q6UWX4 724 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 ZC3H3Q8IXZ2 948 aaKnown RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 RETREG2Q8NC44 543 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 ZNF622Q969S3 477 aaKnown RBP eCLIP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 FAM84AQ96KN4 292 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 NUP58Q9BVL2 599 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 ZNF287Q9HBT7 754 aa6.67□□□□□ -1.34
CLCN3-201ENST00000347613 CHORDC1Q9UHD1 332 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-201ENST00000347613 PJA2O43164 708 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 AKR1B10O60218 316 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 ECE2O60344 883 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 PON1P27169 355 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 FKBP3Q00688 224 aaKnown RBP6.66□□□□□ -1.34
CLCN3-201ENST00000347613 LRRC63Q05C16 580 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 ZSCAN26Q16670 478 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 TBC1D10BQ4KMP7 808 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-201ENST00000347613 TTMPQ5BVD1 217 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 TEKT1Q969V4 418 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 BORCS6Q96GS4 357 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 GPR88Q9GZN0 384 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 NEUROG2Q9H2A3 272 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 BHMT2Q9H2M3 363 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 FBXO28Q9NVF7 368 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 IGSF9BQ9UPX0 1349 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 CLRN2A0PK11 232 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 SLITRK3O94933 977 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 ECHS1P30084 290 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 FLT3P36888 993 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 TNNT3P45378 269 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-201ENST00000347613 MAPK8IP2Q13387 824 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-201ENST00000347613 ZYXQ15942 572 aaKnown RBP6.66□□□□□ -1.34
CLCN3-201ENST00000347613 DDX42Q86XP3 938 aaKnown RBP eCLIP6.66□□□□□ -1.34
CLCN3-201ENST00000347613 CPNE8Q86YQ8 564 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 SH2D3CQ8N5H7 860 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.66□□□□□ -1.342e-6■■■■■ 41.9
CLCN3-201ENST00000347613 ZBTB12Q9Y330 459 aaPredicted RBP6.66□□□□□ -1.34
CLCN3-201ENST00000347613 JRKLQ9Y4A0 524 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 BPTFQ12830 3046 aa6.66□□□□□ -1.34
CLCN3-201ENST00000347613 CHMP2AO43633 222 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 KRT14P02533 472 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 NR2F2P24468 414 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 AARSP49588 968 aaKnown RBP eCLIP6.65□□□□□ -1.34
CLCN3-201ENST00000347613 TMEM266Q2M3C6 531 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 ZNF572Q7Z3I7 529 aaPredicted RBP6.65□□□□□ -1.34
CLCN3-201ENST00000347613 ACP6Q9NPH0 428 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 TAS2R14Q9NYV8 317 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 FER1L6Q2WGJ9 1857 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 ZNFX1Q9P2E3 1918 aaKnown RBP6.65□□□□□ -1.34
CLCN3-201ENST00000347613 ARP10275 920 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 ITGA4P13612 1032 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 COPB2P35606 906 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 MRPL12P52815 198 aaKnown RBP6.65□□□□□ -1.34
CLCN3-201ENST00000347613 DLG4P78352 724 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 RAPGEF1Q13905 1077 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 CCDC40Q4G0X9 1142 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 CBWD6Q4V339 395 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 TDRD12Q587J7 1177 aaKnown RBP6.65□□□□□ -1.34
CLCN3-201ENST00000347613 CBWD3Q5JTY5 395 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 CBWD5Q5RIA9 395 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 AADACL2Q6P093 401 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 MIGA2Q7L4E1 593 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 C7orf43Q8WVR3 580 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 TRIM34Q9BYJ4 488 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 COL20A1Q9P218 1284 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 PRR12Q9ULL5 1215 aa6.65□□□□□ -1.34
CLCN3-201ENST00000347613 LAMA3Q16787 3333 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 TCP10L2B9ZVM9 353 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 CYP3A4P08684 503 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 MARSP56192 900 aaKnown RBP6.65□□□□□ -1.35
CLCN3-201ENST00000347613 ICA1Q05084 483 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 SPP2Q13103 211 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 EPHA7Q15375 998 aa6.65□□□□□ -1.35
CLCN3-201ENST00000347613 DNAJC21Q5F1R6 531 aaKnown RBP6.65□□□□□ -1.35
CLCN3-201ENST00000347613 SND1Q7KZF4 910 aaKnown RBP eCLIP6.65□□□□□ -1.353e-6■■□□□ 11.7
CLCN3-201ENST00000347613 TRMT1LQ7Z2T5 733 aaKnown RBP6.65□□□□□ -1.35
CLCN3-201ENST00000347613 MMGT1Q8N4V1 131 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms