RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Cul4aQ3TCH7 759 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Krt87Q6IMF0 495 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 ZwilchQ8R060 589 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 PhkbQ7TSH2 1085 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Tfap4Q9JIZ5 338 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 PigoQ9JJI6 1093 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Gm2237E9Q501 211 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Gm3591K7N6X2 186 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 C2cd5Q7TPS5 1016 aaKnown RBP16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Rfx6Q8C7R7 927 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Usp15Q8R5H1 981 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Plcb4Q91UZ1 1175 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 RasefQ5RI75 627 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Arhgap26Q6ZQ82 814 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Q80ZQ3 298 aa16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Tmed10Q9D1D4 219 aaKnown RBP16.8■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Snap23O09044 210 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Ckap2Q3V1H1 664 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Trpa1Q8BLA8 1125 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Prpsap2Q8R574 369 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Fkbp6Q91XW8 327 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Magi2Q9WVQ1 1275 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Erbb3Q61526 1339 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Cab39Q06138 341 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Heatr3Q8BQM4 679 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Tex12Q9CR81 123 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Edc4Q3UJB9 1406 aaKnown RBP16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Gm4841E9QAA8 417 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Gabpb1Q00420 383 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 CpQ61147 1061 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Uba6Q8C7R4 1053 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Cdk13Q69ZA1 1511 aaKnown RBP16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Trip11E9Q512 1976 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Krt36B1AQ75 473 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Hoxc9P09633 260 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Cyp4f40G3UW81 524 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 4933406M09RikG3XA12 479 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Serpinb8O08800 374 aaKnown RBP16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Hps1O08983 704 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Ccdc90bQ8C3X2 256 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 4930519G04RikQ9CPT7 205 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Baz2bA2AUY4 2123 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Olfm3P63056 478 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Miga1Q4QQM5 600 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Usp28Q5I043 1051 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Lrrc14Q8VC16 493 aa16.79■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Lrrc32G3XA59 663 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Upf3bQ3ULL6 472 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Pabpc4Q6PHQ9 660 aaKnown RBP16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Tmem132dQ76HP3 1097 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Trim56Q80VI1 734 aaKnown RBP16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Ccdc130Q9D516 385 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Trim15G3UY57 292 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Krt75Q8BGZ7 551 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 QarsQ8BML9 775 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Atp6v1b1Q91YH6 513 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 PudpQ9D5U5 234 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Akr1b7P21300 316 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Ppp3ccP48455 513 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Ahcyl2Q68FL4 613 aaKnown RBP16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 NclnQ8VCM8 563 aaKnown RBP16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Pgm1Q9D0F9 562 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Meis1Q60954 390 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Vil1Q62468 827 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 GartQ64737 1010 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Ppp2r2aQ6P1F6 447 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Pdik1lQ8QZR7 341 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Cuedc2Q9CXX9 284 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Calr3Q9D9Q6 380 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Hdac6Q9Z2V5 1149 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Astn2Q80Z10 1352 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Cd22P35329 862 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Hps3Q91VB4 1002 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Snx24Q9CRB0 169 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Chil3O35744 398 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Krt1P04104 637 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Runx2Q08775 607 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Bend3Q6PAL0 825 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Tcp10aQ80W76 438 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Add3Q9QYB5 706 aaKnown RBP16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Shroom2A2ALU4 1481 aa16.78■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Gm9774A0A0A6YVU8 407 aa16.77■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Pou5f1P20263 352 aaKnown RBP16.77■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Kiaa1841Q68FF0 718 aa16.77■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Rtl3Q6P1Y1 553 aa16.77■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Q8BWG4 1187 aa16.77■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Snx16Q8C080 344 aa16.77■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Thoc2B1AZI6 1594 aaKnown RBP16.77■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Spata18Q0P557 537 aa16.77■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Tcp10bE9PYJ0 438 aa16.77■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Chmp2bQ8BJF9 213 aa16.77■□□□□ 0.28
Ubr3-201ENSMUST00000055758 SynmQ70IV5 1561 aa16.77■□□□□ 0.28
Ubr3-201ENSMUST00000055758 Dgcr8Q9EQM6 773 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Gm21497A0A087WRK3 222 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 A0A286YCQ6 122 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Apba1B2RUJ5 842 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Slc4a1P04919 929 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 Fbxo11Q7TPD1 930 aaKnown RBP16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 AdalQ80SY6 360 aa16.77■□□□□ 0.27
Ubr3-201ENSMUST00000055758 4931423N10RikQ9D4J9 382 aa16.77■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms