RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Ublcp1Q8BGR9 318 aa20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Gpr180Q8BPS4 441 aa20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 CbsQ91WT9 561 aa20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 SyncQ9EPM5 470 aa20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Phtf1Q9QZ09 761 aa20.17■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 InhbeO08717 350 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Mpp3O88910 568 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 SpidrQ8BGX7 933 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 H6pdQ8CFX1 789 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 LrmdaQ9D9B4 229 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Plxnb2B2RXS4 1842 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Mroh8E9PYI4 1049 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Sema4dO09126 861 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Nr1i3O35627 358 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Sema6bO54951 886 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Il13ra2O88786 383 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ap1m1P35585 423 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 GscQ02591 256 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Vmn1r209Q5NC97 312 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Nell2Q61220 819 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Six2Q62232 296 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Msl1Q6PDM1 616 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 GopcQ8BH60 463 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Alg1Q921Q3 482 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Capn9Q9D805 690 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Sh2b2Q9JID9 621 aa20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Hyou1Q9JKR6 999 aaKnown RBP20.16■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Flvcr1B2RXV4 560 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Cdc25aP48964 514 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Kiaa0319Q5SZV5 1081 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Asap3Q5U464 904 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 PodnQ7TQ62 611 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Klhdc7aA2APT9 773 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Gm8298J3QPI0 401 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Cetn3O35648 167 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Zmym1Q3TJB1 983 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ddx10Q80Y44 875 aaKnown RBP20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Usp38Q8BW70 1042 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Zfp446Q8C9M8 523 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 PpihQ9D868 188 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ascc1Q9D8Z1 356 aaKnown RBP20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ankrd2Q9WV06 328 aa20.15■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 1700017N19RikA0A087WPJ1 469 aa20.14■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Apol10bG3X9K7 334 aa20.14■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Nedd1P33215 660 aa20.14■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Siah1bQ06985 282 aa20.14■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Klra4Q60651 263 aa20.14■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Slc51bQ80WK2 128 aa20.14■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Lrrc4cQ8C031 640 aa20.14■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Ttc22Q8C159 568 aa20.14■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Coro7Q9D2V7 922 aa20.14■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Arl2bpQ9D385 163 aa20.14■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Myl7Q9QVP4 175 aa20.14■□□□□ 0.82
Ccdc3-201ENSMUST00000027988 Flt1P35969 1333 aa20.14■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Pcdha4O88689 947 aa20.14■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Klra9Q2TJJ8 266 aa20.14■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Rapgef1Q3UHC1 1224 aa20.14■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Krt9Q6RHW0 743 aa20.14■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Depdc1aQ8CIG0 804 aa20.14■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 LgsnQ8CIX8 563 aa20.14■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Fam111aQ9D2L9 613 aa20.14■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 AvenQ9D9K3 342 aa20.14■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Pja1O55176 578 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Znf367Q0VDT2 340 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Nr1d1Q3UV55 615 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Rasa3Q60790 834 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Epha7Q61772 998 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 CrkQ64010 304 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Scyl2Q8CFE4 930 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Dcaf8Q8N7N5 591 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Senp2Q91ZX6 588 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Pacsin2Q9WVE8 486 aaKnown RBP20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Ap1b1O35643 943 aaKnown RBP20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 GalcP54818 684 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Atp13a4Q5XF90 1193 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Tmc4Q7TQ65 694 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Pank4Q80YV4 820 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Ms4a5Q810P8 197 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Rbm41Q8JZV4 413 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Ces4aQ8R0W5 563 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Eif2ak1Q9Z2R9 619 aa20.13■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Fam129cD3YZB0 591 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 ProcP33587 460 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Polr2fP61219 127 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 HelqQ2VPA6 1069 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Nhej1Q3KNJ2 295 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Rnpc3Q3UZ01 514 aaKnown RBP20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Kiaa1211Q5PR69 1207 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Ift20Q61025 132 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Enox2Q8R0Z2 598 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 4931423N10RikQ9D4J9 382 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Cdc42ep4Q9JM96 349 aaKnown RBP20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Orc1Q9Z1N2 840 aaKnown RBP20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Fam71aB7XG49 585 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Nmt1O70310 496 aaKnown RBP20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Krt31Q61765 416 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Atp2b4Q6Q477 1205 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Haus1Q8BHX1 278 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Slc4a8Q8JZR6 1089 aa20.12■□□□□ 0.81
Ccdc3-201ENSMUST00000027988 Tut1Q8R3F9 869 aa20.12■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms