RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Pacsin2Q9WVE8 486 aaKnown RBP17.91■□□□□ 0.46
Trim8-201ENSMUST00000026008 Sema4dO09126 861 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Gap43P06837 227 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Zc3h18Q0P678 948 aaKnown RBP17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 KaznQ69ZS8 779 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Anks6Q6GQX6 883 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Usp38Q8BW70 1042 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Lsm14bQ8CGC4 385 aaKnown RBP17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 PccaQ91ZA3 724 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Vwa5aQ99KC8 793 aaKnown RBP17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Kif13bA0A286YCV9 1847 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Ltbp1Q8CG19 1712 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 1810065E05RikQ5NC41 235 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Pank4Q80YV4 820 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Ttc22Q8C159 568 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Smc6Q924W5 1097 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Ankrd2Q9WV06 328 aa17.9■□□□□ 0.46
Trim8-201ENSMUST00000026008 Lbhd1A0A087WPA0 259 aa17.89■□□□□ 0.46
Trim8-201ENSMUST00000026008 Gdap1O88741 358 aa17.89■□□□□ 0.46
Trim8-201ENSMUST00000026008 Tnnc1P19123 161 aa17.89■□□□□ 0.46
Trim8-201ENSMUST00000026008 Rbm46P86049 533 aa17.89■□□□□ 0.46
Trim8-201ENSMUST00000026008 Kiaa1211Q5PR69 1207 aa17.89■□□□□ 0.46
Trim8-201ENSMUST00000026008 Llgl1Q80Y17 1036 aa17.89■□□□□ 0.46
Trim8-201ENSMUST00000026008 Armc6Q8BNU0 468 aa17.89■□□□□ 0.46
Trim8-201ENSMUST00000026008 Rbm41Q8JZV4 413 aa17.89■□□□□ 0.46
Trim8-201ENSMUST00000026008 CbsQ91WT9 561 aa17.89■□□□□ 0.46
Trim8-201ENSMUST00000026008 Trap1Q9CQN1 706 aaKnown RBP17.89■□□□□ 0.46
Trim8-201ENSMUST00000026008 Rexo2Q9D8S4 237 aa17.89■□□□□ 0.46
Trim8-201ENSMUST00000026008 TicrrQ8BQ33 1889 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Zfp213E9QAW0 468 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Nr1i3O35627 358 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Atp6v0a2P15920 856 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Krt35Q497I4 455 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Gm5935Q497S0 212 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Ttc7aQ8BGB2 858 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Drd5Q8BLD9 478 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Q8BWG4 1187 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Mettl13Q91YR5 698 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Slc40a1Q9JHI9 570 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Mroh8E9PYI4 1049 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Sept2P42208 361 aaKnown RBP17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Opa1P58281 960 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Spout1Q3UHX9 385 aaKnown RBP17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Atxn7Q8R4I1 867 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Bhmt2Q91WS4 363 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 Calr3Q9D9Q6 380 aa17.89■□□□□ 0.45
Trim8-201ENSMUST00000026008 MtrA6H5Y3 1253 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Pcdha4O88689 947 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 ProcP33587 460 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Bend4P86174 541 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Tsga10Q6NY15 697 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 PodnQ7TQ62 611 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Abcf2Q99LE6 628 aaKnown RBP17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 4931423N10RikQ9D4J9 382 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 EmcnQ9R0H2 261 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Slc26a4Q9R155 780 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Tnip1Q9WUU8 647 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Sept3Q9Z1S5 350 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Gfpt2Q9Z2Z9 682 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 D1Pas1P16381 660 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Tmod1P49813 359 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 MlxipQ2VPU4 917 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Gdpd4Q3TT99 632 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Cacna2d4Q5RJF7 1116 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Mybpc2Q5XKE0 1136 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Klra4Q60651 263 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 GnptabQ69ZN6 1235 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Zbed4Q80WQ9 1168 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Micall1Q8BGT6 870 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Rassf2Q8BMS9 326 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Acsl3Q9CZW4 720 aaKnown RBP17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Gm28036V9GXJ1 658 aa17.88■□□□□ 0.45
Trim8-201ENSMUST00000026008 Vcam1P29533 739 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Atp6v1aP50516 617 aaKnown RBP17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 BC051142Q3V0M8 400 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Arhgap44Q5SSM3 814 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Foxo6Q70KY4 559 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Baiap3Q80TT2 1134 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Yipf1Q91VU1 306 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Zbed3Q9D0L1 228 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Znf697Q569E7 569 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Krt31Q61765 416 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Celf4Q7TSY6 486 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Pym1Q8CHP5 203 aaKnown RBP17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Chn1Q91V57 459 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Tsc2Q61037 1814 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 1700017N19RikA0A087WPJ1 469 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Proca1B0QZF7 307 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 AoahO35298 574 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Klra9Q2TJJ8 266 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Kctd16Q5DTY9 427 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 WaplQ65Z40 1200 aaKnown RBP17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 R3hdm2Q80TM6 1044 aaKnown RBP17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Dhx58Q99J87 678 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 Dph6Q9CQ28 267 aa17.87■□□□□ 0.45
Trim8-201ENSMUST00000026008 C4bP01029 1738 aa17.86■□□□□ 0.45
Trim8-201ENSMUST00000026008 Clcn6O35454 870 aa17.86■□□□□ 0.45
Trim8-201ENSMUST00000026008 Lmnb2P21619 596 aaKnown RBP17.86■□□□□ 0.45
Trim8-201ENSMUST00000026008 Gna14P30677 355 aa17.86■□□□□ 0.45
Trim8-201ENSMUST00000026008 Ctnnd1P30999 938 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms