RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	PAC11	P40960	533 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	YJL043W	P47053	257 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	BIO3	P50277	480 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	YGR015C	P53208	328 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	FRE4	P53746	719 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	TIM11	P81449	96 aa	Predicted RBP	6.6	□□□□□ -1.35
SNT309	YPR101W	CCE1	Q03702	353 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	YML108W	Q03759	105 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	SPO77	Q06134	477 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	OPT2	Q06593	877 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	NMD4	Q12129	218 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	NFI1	Q12216	726 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	YPR011C	Q12251	326 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	YPR1	Q12458	312 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.6	□□□□□ -1.35	not detected
SNT309	YPR101W	SRN2	Q99176	213 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	UBR1	P19812	1950 aa		6.6	□□□□□ -1.35
SNT309	YPR101W	YLR422W	Q06409	1932 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	ADE5,7	P07244	802 aa	Known RBP	6.59	□□□□□ -1.35
SNT309	YPR101W	MSF1	P08425	469 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	HMG1	P12683	1054 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	RER1	P25560	188 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	ASF2	P32448	525 aa	Predicted RBP	6.59	□□□□□ -1.35
SNT309	YPR101W	CAT2	P32796	670 aa	Known RBP	6.59	□□□□□ -1.35
SNT309	YPR101W	PPQ1	P32945	549 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	ZRT3	P34240	503 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	TIM17	P39515	158 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	SSU1	P41930	458 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	STE24	P47154	453 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	JHD2	P47156	728 aa	Predicted RBP	6.59	□□□□□ -1.35
SNT309	YPR101W	HMS2	P47175	358 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	YJR149W	P47177	404 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	MUP1	P50276	574 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	MPS2	P53159	387 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	MRH4	P53166	561 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	MKC7	P53379	596 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	MRPL50	P53724	139 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	PRM1	P53835	661 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	NOG1	Q02892	647 aa	Known RBP	6.59	□□□□□ -1.35
SNT309	YPR101W	BSP1	Q06604	576 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	YPQ1	Q12010	308 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	SIA1	Q12212	622 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	MRX4	Q12467	430 aa		6.59	□□□□□ -1.35
SNT309	YPR101W	PDE2	P06776	526 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	SWI5	P08153	709 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	DBP3	P20447	523 aa	Known RBP	6.58	□□□□□ -1.36
SNT309	YPR101W	RPS1B	P23248	255 aa	Known RBP	6.58	□□□□□ -1.36
SNT309	YPR101W	HSP30	P25619	332 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	SYP1	P25623	870 aa	Known RBP	6.58	□□□□□ -1.36
SNT309	YPR101W	TAH1	P25638	111 aa	Predicted RBP	6.58	□□□□□ -1.36
SNT309	YPR101W	HXT4	P32467	576 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	YKL063C	P35725	167 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	EMC3	P36039	253 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	IRS4	P36115	615 aa	Known RBP	6.58	□□□□□ -1.36
SNT309	YPR101W	PCL5	P38794	229 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	HXT6	P39003	570 aa	Known RBP	6.58	□□□□□ -1.36
SNT309	YPR101W	HXT7	P39004	570 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	MIT1	P40002	666 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	YTA6	P40328	754 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	LAS21	P40367	830 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	YIL161W	P40449	235 aa	Known RBP	6.58	□□□□□ -1.36
SNT309	YPR101W	YKE4	P40544	346 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	YJL218W	P40892	196 aa	Known RBP	6.58	□□□□□ -1.36
SNT309	YPR101W	YFL066C	P43538	392 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	YFL052W	P43551	465 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	YJR030C	P47101	745 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	MNT2	P53059	558 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	SCW11	P53189	542 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	YPL014W	Q02606	381 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	YPL071C	Q02864	156 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	TRM82	Q03774	444 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	DIN7	Q12086	430 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	SUS1	Q6WNK7	96 aa		6.58	□□□□□ -1.36
SNT309	YPR101W	SIR3	P06701	978 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	MER1	P16523	270 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	SAR1	P20606	190 aa	Known RBP	6.57	□□□□□ -1.36
SNT309	YPR101W	BUD5	P25300	642 aa	Predicted RBP	6.57	□□□□□ -1.36
SNT309	YPR101W	PEX34	P25584	144 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	ARE1	P25628	610 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	6.57	□□□□□ -1.36	not detected
SNT309	YPR101W	PMT1	P33775	817 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	DHR2	P36009	735 aa	Predicted RBP	6.57	□□□□□ -1.36
SNT309	YPR101W	RPF2	P36160	344 aa	Known RBP	6.57	□□□□□ -1.36
SNT309	YPR101W	SOL2	P37262	315 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	LRP1	P38801	184 aa	Known RBP	6.57	□□□□□ -1.36
SNT309	YPR101W	MDM31	P38880	579 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	RCY1	P39531	840 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	JHD1	P40034	492 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	SER3	P40054	469 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	YGR201C	P42936	225 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	IRC7	P43623	340 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	TPN1	P53099	579 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	MPC1	P53157	130 aa	Known RBP	6.57	□□□□□ -1.36
SNT309	YPR101W	OAZ1	Q02803	292 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	ARG7	Q04728	441 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	YMR034C	Q05131	434 aa	Predicted RBP	6.57	□□□□□ -1.36
SNT309	YPR101W	RGC1	Q06108	1083 aa	Known RBP	6.57	□□□□□ -1.36
SNT309	YPR101W	ARO10	Q06408	635 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	PEX27	Q08580	376 aa		6.57	□□□□□ -1.36
SNT309	YPR101W	YTM1	Q12024	460 aa	Predicted RBP	6.57	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms