RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	MZM1	Q03429	123 aa	Predicted RBP	4.99	□□□□□ -1.61
UBA3	YPR066W	MCP2	Q06567	569 aa		4.99	□□□□□ -1.61
UBA3	YPR066W	POS5	Q06892	414 aa		4.99	□□□□□ -1.61
UBA3	YPR066W	DIS3	Q08162	1001 aa	Known RBP	4.99	□□□□□ -1.61
UBA3	YPR066W	THP1	Q08231	455 aa		4.99	□□□□□ -1.61
UBA3	YPR066W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
UBA3	YPR066W	CRC1	Q12289	327 aa		4.99	□□□□□ -1.61
UBA3	YPR066W	NDJ1	Q12366	352 aa		4.99	□□□□□ -1.61
UBA3	YPR066W	PDH1	Q12428	516 aa	Known RBP	4.99	□□□□□ -1.61
UBA3	YPR066W	BI3	Q9ZZW7	517 aa		4.99	□□□□□ -1.61
UBA3	YPR066W	RAD14	P28519	371 aa		4.98	□□□□□ -1.61
UBA3	YPR066W	TCM62	P38228	572 aa	Known RBP	4.98	□□□□□ -1.61
UBA3	YPR066W	RRT2	P38332	387 aa		4.98	□□□□□ -1.61
UBA3	YPR066W	RTT107	P38850	1070 aa		4.98	□□□□□ -1.61
UBA3	YPR066W	CFD1	P40558	293 aa		4.98	□□□□□ -1.61
UBA3	YPR066W	CAK1	P43568	368 aa	Predicted RBP	4.98	□□□□□ -1.61
UBA3	YPR066W	YGR149W	P48236	432 aa		4.98	□□□□□ -1.61
UBA3	YPR066W	YGL108C	P53139	140 aa		4.98	□□□□□ -1.61
UBA3	YPR066W	GYL1	Q04322	720 aa		4.98	□□□□□ -1.61
UBA3	YPR066W	YDR278C	Q05612	105 aa		4.98	□□□□□ -1.61
UBA3	YPR066W	SPE3	Q12074	293 aa	Known RBP	4.98	□□□□□ -1.61
UBA3	YPR066W	GPM3	Q12326	303 aa		4.98	□□□□□ -1.61
UBA3	YPR066W	RAD52	P06778	471 aa	Known RBP	4.97	□□□□□ -1.61
UBA3	YPR066W	YAP1	P19880	650 aa	Known RBP	4.97	□□□□□ -1.61
UBA3	YPR066W	RPS2	P25443	254 aa	Known RBP	4.97	□□□□□ -1.61
UBA3	YPR066W	MDL1	P33310	695 aa		4.97	□□□□□ -1.61
UBA3	YPR066W	LAG1	P38703	411 aa		4.97	□□□□□ -1.61
UBA3	YPR066W	CTM1	P38818	585 aa		4.97	□□□□□ -1.61
UBA3	YPR066W	AVT2	P39981	480 aa		4.97	□□□□□ -1.61
UBA3	YPR066W	VRG4	P40107	337 aa		4.97	□□□□□ -1.61
UBA3	YPR066W	YIL024C	P40543	189 aa		4.97	□□□□□ -1.61
UBA3	YPR066W	VPS25	P47142	202 aa		4.97	□□□□□ -1.61
UBA3	YPR066W	NUP100	Q02629	959 aa		4.97	□□□□□ -1.61
UBA3	YPR066W	PIR3	Q03180	325 aa		4.97	□□□□□ -1.61
UBA3	YPR066W	TSR1	Q07381	788 aa	Known RBP	4.97	□□□□□ -1.61
UBA3	YPR066W	RDR1	Q08904	546 aa		4.97	□□□□□ -1.61
UBA3	YPR066W	PEP5	P12868	1029 aa		4.96	□□□□□ -1.62
UBA3	YPR066W	AFG1	P32317	509 aa		4.96	□□□□□ -1.62
UBA3	YPR066W	EFB1	P32471	206 aa	Known RBP	4.96	□□□□□ -1.62
UBA3	YPR066W	MSN2	P33748	704 aa		4.96	□□□□□ -1.62
UBA3	YPR066W	FLO5	P38894	1075 aa		4.96	□□□□□ -1.62
UBA3	YPR066W	RSM25	P40496	264 aa		4.96	□□□□□ -1.62
UBA3	YPR066W	YJR054W	P47114	497 aa		4.96	□□□□□ -1.62
UBA3	YPR066W	MND1	P53102	219 aa		4.96	□□□□□ -1.62
UBA3	YPR066W	ESBP6	P53918	673 aa		4.96	□□□□□ -1.62
UBA3	YPR066W	KTR5	P53966	522 aa	Predicted RBP	4.96	□□□□□ -1.62
UBA3	YPR066W	ERG13	P54839	491 aa	Known RBP	4.96	□□□□□ -1.62
UBA3	YPR066W	SHR3	Q02774	210 aa		4.96	□□□□□ -1.62
UBA3	YPR066W	YDR222W	Q04925	415 aa		4.96	□□□□□ -1.62
UBA3	YPR066W	HCR1	Q05775	265 aa	Known RBP	4.96	□□□□□ -1.62
UBA3	YPR066W	DDC1	Q08949	612 aa		4.96	□□□□□ -1.62
UBA3	YPR066W	SPS4	P09937	338 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	YER190C-B	P0CX94	160 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	YEL077W-A	P0CX95	160 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	YGR296C-B	P0CX96	160 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	YPL283W-B	P0CX97	160 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	YPR204C-A	P0CX98	160 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	REV1	P12689	985 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	RRP7	P25368	297 aa	Predicted RBP	4.95	□□□□□ -1.62
UBA3	YPR066W	KDX1	P36005	433 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	PIM1	P36775	1133 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	BNA4	P38169	460 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	GDI1	P39958	451 aa	Known RBP	4.95	□□□□□ -1.62
UBA3	YPR066W	GUF1	P46943	645 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	COS5	P47187	383 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	YPL014W	Q02606	381 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	CTL1	Q03220	320 aa	Known RBP	4.95	□□□□□ -1.62
UBA3	YPR066W	EKI1	Q03764	534 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	THI7	Q05998	598 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	COS7	Q07788	383 aa		4.95	□□□□□ -1.62
UBA3	YPR066W	SUC2	P00724	532 aa		4.94	□□□□□ -1.62
UBA3	YPR066W	RPS3	P05750	240 aa	Known RBP	4.94	□□□□□ -1.62
UBA3	YPR066W	MTF1	P14908	341 aa	Known RBP	4.94	□□□□□ -1.62
UBA3	YPR066W	SPO12	P17123	173 aa		4.94	□□□□□ -1.62
UBA3	YPR066W	PHO13	P19881	312 aa		4.94	□□□□□ -1.62
UBA3	YPR066W	SNC1	P31109	117 aa		4.94	□□□□□ -1.62
UBA3	YPR066W	SLM4	P38247	162 aa		4.94	□□□□□ -1.62
UBA3	YPR066W	SHE3	P38272	425 aa	Known RBP	4.94	□□□□□ -1.62
UBA3	YPR066W	YER189W	P40104	122 aa		4.94	□□□□□ -1.62
UBA3	YPR066W	SEC28	P40509	296 aa	Known RBP	4.94	□□□□□ -1.62
UBA3	YPR066W	EFM4	P40516	257 aa		4.94	□□□□□ -1.62
UBA3	YPR066W	SKO1	Q02100	647 aa		4.94	□□□□□ -1.62
UBA3	YPR066W	LGE1	Q02796	332 aa	Known RBP	4.94	□□□□□ -1.62
UBA3	YPR066W	ARO80	Q04052	950 aa		4.94	□□□□□ -1.62
UBA3	YPR066W	RRP45	Q05636	305 aa	Known RBP	4.94	□□□□□ -1.62
UBA3	YPR066W	EMP46	Q12396	444 aa		4.94	□□□□□ -1.62
UBA3	YPR066W	YPR089W	O13585	888 aa		4.93	□□□□□ -1.62
UBA3	YPR066W	RHO2	P06781	192 aa		4.93	□□□□□ -1.62
UBA3	YPR066W	CDC33	P07260	213 aa	Known RBP	4.93	□□□□□ -1.62
UBA3	YPR066W	GYP6	P32806	458 aa		4.93	□□□□□ -1.62
UBA3	YPR066W	NTC20	P38302	140 aa	Predicted RBP	4.93	□□□□□ -1.62
UBA3	YPR066W	TIF5	P38431	405 aa	Known RBP	4.93	□□□□□ -1.62
UBA3	YPR066W	MED6	P38782	295 aa		4.93	□□□□□ -1.62
UBA3	YPR066W	SPT8	P38915	602 aa		4.93	□□□□□ -1.62
UBA3	YPR066W	SER3	P40054	469 aa		4.93	□□□□□ -1.62
UBA3	YPR066W	BTT1	P40314	149 aa	Predicted RBP	4.93	□□□□□ -1.62
UBA3	YPR066W	ERG10	P41338	398 aa	Known RBP	4.93	□□□□□ -1.62
UBA3	YPR066W	YJL055W	P47044	245 aa		4.93	□□□□□ -1.62
UBA3	YPR066W	YJR154W	P47181	346 aa		4.93	□□□□□ -1.62
UBA3	YPR066W	VEL1	P53058	206 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms