RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W ECM3Q99252 613 aa2.14□□□□□ -2.07
SEC16YPL085W CNA1P23287 553 aa2.13□□□□□ -2.07
SEC16YPL085W SGV1P23293 657 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W PTP2P29461 750 aa2.13□□□□□ -2.07
SEC16YPL085W SEF1P34228 1148 aa2.13□□□□□ -2.07
SEC16YPL085W MDM31P38880 579 aa2.13□□□□□ -2.07
SEC16YPL085W TAD1P53065 400 aa2.13□□□□□ -2.07
SEC16YPL085W HST2P53686 357 aa2.13□□□□□ -2.07
SEC16YPL085W MRPL19P53875 158 aa2.13□□□□□ -2.07
SEC16YPL085W FAP1P53971 965 aa2.13□□□□□ -2.07
SEC16YPL085W YPL039WQ03080 316 aa2.13□□□□□ -2.07
SEC16YPL085W RSN1Q03516 953 aa2.13□□□□□ -2.07
SEC16YPL085W TAF12Q03761 539 aa2.13□□□□□ -2.07
SEC16YPL085W GMC1Q04399 608 aa2.13□□□□□ -2.07
SEC16YPL085W FMP42Q04991 504 aa2.13□□□□□ -2.07
SEC16YPL085W DUS4Q06063 367 aa2.13□□□□□ -2.07
SEC16YPL085W VPS74Q06385 345 aa2.13□□□□□ -2.07
SEC16YPL085W IPK1Q06667 281 aa2.13□□□□□ -2.07
SEC16YPL085W NBA1Q08229 501 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W HRK1Q08732 759 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W UTP23Q12339 254 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W MRX4Q12467 430 aa2.13□□□□□ -2.07
SEC16YPL085W YPR096CO13587 100 aa2.13□□□□□ -2.07
SEC16YPL085W AMD1P15274 810 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W URK1P27515 501 aa2.13□□□□□ -2.07
SEC16YPL085W HBS1P32769 611 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W SHE2P36068 246 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
SEC16YPL085W DCW1P36091 449 aa2.13□□□□□ -2.07
SEC16YPL085W YBR197CP38306 217 aa2.13□□□□□ -2.07
SEC16YPL085W NPT1P39683 429 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W TMN3P40071 706 aa2.13□□□□□ -2.07
SEC16YPL085W RFC2P40348 353 aa2.13□□□□□ -2.07
SEC16YPL085W STB2P46679 850 aa2.13□□□□□ -2.07
SEC16YPL085W CSN12P47130 423 aa2.13□□□□□ -2.07
SEC16YPL085W YGR016WP53209 190 aa2.13□□□□□ -2.07
SEC16YPL085W YMR210WQ03649 449 aa2.13□□□□□ -2.07
SEC16YPL085W YMR315WQ04869 349 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W YLR345WQ06137 509 aa2.13□□□□□ -2.07
SEC16YPL085W DCS1Q06151 350 aa2.13□□□□□ -2.07
SEC16YPL085W BRE4Q07660 1125 aa2.13□□□□□ -2.07
SEC16YPL085W RCL1Q08096 367 aaPredicted RBP2.13□□□□□ -2.07
SEC16YPL085W PNO1Q99216 274 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W SPT3P06844 337 aa2.13□□□□□ -2.07
SEC16YPL085W RAD14P28519 371 aa2.13□□□□□ -2.07
SEC16YPL085W ITR2P30606 609 aa2.13□□□□□ -2.07
SEC16YPL085W ERG3P32353 365 aa2.13□□□□□ -2.07
SEC16YPL085W PET309P32522 965 aaPredicted RBP2.13□□□□□ -2.07
SEC16YPL085W SOF1P33750 489 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W YBR032WP38223 100 aa2.13□□□□□ -2.07
SEC16YPL085W GTS1P40956 396 aa2.13□□□□□ -2.07
SEC16YPL085W YFL052WP43551 465 aa2.13□□□□□ -2.07
SEC16YPL085W CCC1P47818 322 aa2.13□□□□□ -2.07
SEC16YPL085W RSM23Q01163 450 aa2.13□□□□□ -2.07
SEC16YPL085W HOT1Q03213 719 aa2.13□□□□□ -2.07
SEC16YPL085W PML39Q03760 334 aa2.13□□□□□ -2.07
SEC16YPL085W CTK1Q03957 528 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W BDS1Q08347 646 aa2.13□□□□□ -2.07
SEC16YPL085W TUB1P09733 447 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W STE12P13574 688 aa2.13□□□□□ -2.07
SEC16YPL085W GBP2P25555 427 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
SEC16YPL085W ORC6P38826 435 aa2.13□□□□□ -2.07
SEC16YPL085W RRD1P40454 393 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W TOS2P50078 622 aa2.13□□□□□ -2.07
SEC16YPL085W GPG1P53130 126 aa2.13□□□□□ -2.07
SEC16YPL085W RMD9P53140 646 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W YGR042WP53227 271 aa2.13□□□□□ -2.07
SEC16YPL085W DCR2Q05924 578 aa2.13□□□□□ -2.07
SEC16YPL085W UIP4Q08926 304 aa2.13□□□□□ -2.07
SEC16YPL085W MRH1Q12117 320 aaPredicted RBP2.13□□□□□ -2.07
SEC16YPL085W COX2P00410 251 aa2.13□□□□□ -2.07
SEC16YPL085W FPS1P23900 669 aa2.13□□□□□ -2.07
SEC16YPL085W PEX3P28795 441 aa2.13□□□□□ -2.07
SEC16YPL085W GMH1P36125 273 aa2.13□□□□□ -2.07
SEC16YPL085W PBP2P38151 413 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
SEC16YPL085W SIF2P38262 535 aa2.13□□□□□ -2.07
SEC16YPL085W PLB1P39105 664 aa2.13□□□□□ -2.07
SEC16YPL085W LEM3P42838 414 aa2.13□□□□□ -2.07
SEC16YPL085W AIM22P47051 409 aa2.13□□□□□ -2.07
SEC16YPL085W NBP35P52920 328 aa2.13□□□□□ -2.07
SEC16YPL085W YAP1802P53309 568 aa2.13□□□□□ -2.07
SEC16YPL085W PDR16P53860 351 aaKnown RBP2.13□□□□□ -2.07
SEC16YPL085W YNL034WP53963 612 aa2.13□□□□□ -2.07
SEC16YPL085W YNL018CP53976 612 aa2.13□□□□□ -2.07
SEC16YPL085W MRPL1Q04599 285 aa2.13□□□□□ -2.07
SEC16YPL085W ARR1Q06596 294 aa2.13□□□□□ -2.07
SEC16YPL085W OPI10Q08202 246 aa2.13□□□□□ -2.07
SEC16YPL085W YOL107WQ12239 342 aa2.13□□□□□ -2.07
SEC16YPL085W YRM1Q12340 786 aa2.13□□□□□ -2.07
SEC16YPL085W PSF1Q12488 208 aa2.13□□□□□ -2.07
SEC16YPL085W SET6Q12529 373 aa2.13□□□□□ -2.07
SEC16YPL085W TPK3P05986 398 aa2.12□□□□□ -2.07
SEC16YPL085W PRB1P09232 635 aa2.12□□□□□ -2.07
SEC16YPL085W MDH1P17505 334 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
SEC16YPL085W ACH1P32316 526 aa2.12□□□□□ -2.07
SEC16YPL085W NAT2P37293 288 aa2.12□□□□□ -2.07
SEC16YPL085W YHL044WP38727 235 aa2.12□□□□□ -2.07
SEC16YPL085W YDR089WP38966 869 aa2.12□□□□□ -2.07
SEC16YPL085W SIT1P39980 628 aa2.12□□□□□ -2.07
SEC16YPL085W SMX2P40204 77 aaKnown RBP2.12□□□□□ -2.07
SEC16YPL085W RIM8P53179 542 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms