RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C CCT6P39079 546 aa3.09□□□□□ -1.91
LCB4YOR171C EDC3P39998 551 aaKnown RBP3.09□□□□□ -1.91
LCB4YOR171C YIL001WP40560 513 aa3.09□□□□□ -1.91
LCB4YOR171C CIN1P40987 1014 aa3.09□□□□□ -1.91
LCB4YOR171C YJL132WP47014 750 aa3.09□□□□□ -1.91
LCB4YOR171C CAB5Q03941 241 aa3.09□□□□□ -1.91
LCB4YOR171C PDS5Q04264 1277 aa3.09□□□□□ -1.91
LCB4YOR171C MYO5Q04439 1219 aaKnown RBP3.09□□□□□ -1.91
LCB4YOR171C YMR226CQ05016 267 aaKnown RBP3.09□□□□□ -1.91
LCB4YOR171C RRG8Q06109 277 aa3.09□□□□□ -1.91
LCB4YOR171C PIG1Q06216 648 aa3.09□□□□□ -1.91
LCB4YOR171C TMA16Q08687 178 aa3.09□□□□□ -1.91
LCB4YOR171C LCB4Q12246 624 aa3.09□□□□□ -1.91
LCB4YOR171C YBR255C-AQ3E776 120 aa3.09□□□□□ -1.91
LCB4YOR171C ECM5Q03214 1411 aa3.09□□□□□ -1.91
LCB4YOR171C GAL80P04387 435 aa3.09□□□□□ -1.92
LCB4YOR171C PEP5P12868 1029 aa3.09□□□□□ -1.92
LCB4YOR171C POL30P15873 258 aaKnown RBP3.09□□□□□ -1.92
LCB4YOR171C SPO11P23179 398 aa3.09□□□□□ -1.92
LCB4YOR171C DAL2P25335 343 aa3.09□□□□□ -1.92
LCB4YOR171C IMG1P25626 169 aa3.09□□□□□ -1.92
LCB4YOR171C KRE2P27809 442 aa3.09□□□□□ -1.92
LCB4YOR171C VPH2P32341 215 aa3.09□□□□□ -1.92
LCB4YOR171C HXT3P32466 567 aaKnown RBP3.09□□□□□ -1.92
LCB4YOR171C DOA1P36037 715 aa3.09□□□□□ -1.92
LCB4YOR171C PAC2P39937 518 aa3.09□□□□□ -1.92
LCB4YOR171C HXT14P42833 540 aa3.09□□□□□ -1.92
LCB4YOR171C TOS3P43637 560 aa3.09□□□□□ -1.92
LCB4YOR171C YGR149WP48236 432 aa3.09□□□□□ -1.92
LCB4YOR171C LSG1P53145 640 aaKnown RBP3.09□□□□□ -1.92
LCB4YOR171C IST1P53843 298 aaPredicted RBP3.09□□□□□ -1.92
LCB4YOR171C ADE16P54113 591 aaKnown RBP3.09□□□□□ -1.92
LCB4YOR171C UBP16Q02863 499 aa3.09□□□□□ -1.92
LCB4YOR171C FMP30Q02883 468 aa3.09□□□□□ -1.92
LCB4YOR171C IRC4Q03036 179 aa3.09□□□□□ -1.92
LCB4YOR171C YML037CQ03703 340 aa3.09□□□□□ -1.92
LCB4YOR171C ACL4Q03771 387 aa3.09□□□□□ -1.92
LCB4YOR171C YDL242WQ07746 117 aa3.09□□□□□ -1.92
LCB4YOR171C YOL075CQ08234 1294 aa3.09□□□□□ -1.92
LCB4YOR171C DCP1Q12517 231 aaPredicted RBP3.09□□□□□ -1.92
LCB4YOR171C PNO1Q99216 274 aaKnown RBP3.09□□□□□ -1.92
LCB4YOR171C VCX1Q99385 411 aa3.09□□□□□ -1.92
LCB4YOR171C BNR1P40450 1375 aa3.08□□□□□ -1.92
LCB4YOR171C KRS1P15180 591 aaKnown RBP3.08□□□□□ -1.92
LCB4YOR171C SNF6P18888 332 aa3.08□□□□□ -1.92
LCB4YOR171C SAR1P20606 190 aaKnown RBP3.08□□□□□ -1.92
LCB4YOR171C PDE1P22434 369 aa3.08□□□□□ -1.92
LCB4YOR171C URK1P27515 501 aa3.08□□□□□ -1.92
LCB4YOR171C NAM9P27929 486 aa3.08□□□□□ -1.92
LCB4YOR171C SSO1P32867 290 aa3.08□□□□□ -1.92
LCB4YOR171C SEC66P33754 206 aa3.08□□□□□ -1.92
LCB4YOR171C SRP102P36057 244 aaPredicted RBP3.08□□□□□ -1.92
LCB4YOR171C RFT1P38206 574 aaPredicted RBP3.08□□□□□ -1.92
LCB4YOR171C FES1P38260 290 aa3.08□□□□□ -1.92
LCB4YOR171C FAD1P38913 306 aa3.08□□□□□ -1.92
LCB4YOR171C SAP1P39955 897 aaKnown RBP3.08□□□□□ -1.92
LCB4YOR171C YER137CP40083 148 aaKnown RBP3.08□□□□□ -1.92
LCB4YOR171C SOK1P40317 901 aa3.08□□□□□ -1.92
LCB4YOR171C CIN5P40917 295 aa3.08□□□□□ -1.92
LCB4YOR171C TDA10P42938 290 aa3.08□□□□□ -1.92
LCB4YOR171C ALB1P47019 175 aaPredicted RBP3.08□□□□□ -1.92
LCB4YOR171C YJL118WP47022 219 aa3.08□□□□□ -1.92
LCB4YOR171C ZAP1P47043 880 aa3.08□□□□□ -1.92
LCB4YOR171C YGL159WP53110 370 aa3.08□□□□□ -1.92
LCB4YOR171C IMO32P53219 342 aa3.08□□□□□ -1.92
LCB4YOR171C YGR079WP53249 370 aa3.08□□□□□ -1.92
LCB4YOR171C SKI8Q02793 397 aaPredicted RBP3.08□□□□□ -1.92
LCB4YOR171C RPC11Q04307 110 aaPredicted RBP3.08□□□□□ -1.92
LCB4YOR171C PEX12Q04370 399 aa3.08□□□□□ -1.92
LCB4YOR171C HRD3Q05787 833 aa3.08□□□□□ -1.92
LCB4YOR171C YPL272CQ08984 517 aa3.08□□□□□ -1.92
LCB4YOR171C YRA1Q12159 226 aaKnown RBP3.08□□□□□ -1.92
LCB4YOR171C HIS4P00815 799 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C LEU4P06208 619 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C CDC21P06785 304 aa3.07□□□□□ -1.92
LCB4YOR171C RAD3P06839 778 aa3.07□□□□□ -1.92
LCB4YOR171C RNR2P09938 399 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C RPS24AP0CX31 135 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C RPS24BP0CX32 135 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C FBA1P14540 359 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C CBF1P17106 351 aa3.07□□□□□ -1.92
LCB4YOR171C MGR1P25573 417 aa3.07□□□□□ -1.92
LCB4YOR171C PRR1P28708 518 aa3.07□□□□□ -1.92
LCB4YOR171C MRPL9P31334 269 aa3.07□□□□□ -1.92
LCB4YOR171C SPS19P32573 292 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C SSE2P32590 693 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C RAD23P32628 398 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C WBP1P33767 430 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C AST1P35183 429 aa3.07□□□□□ -1.92
LCB4YOR171C SNU114P36048 1008 aaKnown RBP3.07□□□□□ -1.92
LCB4YOR171C TUL1P36096 758 aa3.07□□□□□ -1.92
LCB4YOR171C FLO10P36170 1169 aa3.07□□□□□ -1.92
LCB4YOR171C HMT1P38074 348 aa3.07□□□□□ -1.92
LCB4YOR171C FIG1P38224 298 aa3.07□□□□□ -1.92
LCB4YOR171C MAF1P41910 395 aa3.07□□□□□ -1.92
LCB4YOR171C YJR056CP47115 236 aa3.07□□□□□ -1.92
LCB4YOR171C YIP5P53108 310 aa3.07□□□□□ -1.92
LCB4YOR171C YGR042WP53227 271 aa3.07□□□□□ -1.92
LCB4YOR171C COG2P53271 262 aa3.07□□□□□ -1.92
LCB4YOR171C IPI3P53877 555 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms