RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W ROG1P53118 685 aa3.4□□□□□ -1.87
TRM112YNR046W ARK1P53974 638 aa3.4□□□□□ -1.87
TRM112YNR046W MEH1Q02205 184 aa3.4□□□□□ -1.87
TRM112YNR046W RRP9Q06506 573 aaKnown RBP3.4□□□□□ -1.87
TRM112YNR046W RMD5Q12508 421 aa3.4□□□□□ -1.87
TRM112YNR046W ILV5P06168 395 aaKnown RBP3.39□□□□□ -1.87
TRM112YNR046W NFT1P0CE68 1218 aa3.39□□□□□ -1.87
TRM112YNR046W PRP16P15938 1071 aaPredicted RBP3.39□□□□□ -1.87
TRM112YNR046W SPS22P25380 463 aa3.39□□□□□ -1.87
TRM112YNR046W POT1P27796 417 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
TRM112YNR046W UIP5P36137 443 aa3.39□□□□□ -1.87
TRM112YNR046W ATP3P38077 311 aaKnown RBP3.39□□□□□ -1.87
TRM112YNR046W RIB5P38145 238 aa3.39□□□□□ -1.87
TRM112YNR046W YBL028CP38202 106 aa3.39□□□□□ -1.87
TRM112YNR046W GPI16P38875 610 aa3.39□□□□□ -1.87
TRM112YNR046W RRT5P43607 289 aa3.39□□□□□ -1.87
TRM112YNR046W PHB2P50085 310 aa3.39□□□□□ -1.87
TRM112YNR046W YIP5P53108 310 aa3.39□□□□□ -1.87
TRM112YNR046W IBD2P53892 351 aa3.39□□□□□ -1.87
TRM112YNR046W STD1Q02794 444 aa3.39□□□□□ -1.87
TRM112YNR046W YAP7Q08182 245 aa3.39□□□□□ -1.87
TRM112YNR046W NBL1Q3E7Y6 73 aa3.39□□□□□ -1.87
TRM112YNR046W SPO12P17123 173 aa3.38□□□□□ -1.87
TRM112YNR046W DAP2P18962 818 aa3.38□□□□□ -1.87
TRM112YNR046W TRX1P22217 103 aaKnown RBP3.38□□□□□ -1.87
TRM112YNR046W NAT2P37293 288 aa3.38□□□□□ -1.87
TRM112YNR046W QDR3P38227 689 aa3.38□□□□□ -1.87
TRM112YNR046W SIF2P38262 535 aa3.38□□□□□ -1.87
TRM112YNR046W MNL1P38888 796 aa3.38□□□□□ -1.87
TRM112YNR046W DHH1P39517 506 aaKnown RBP3.38□□□□□ -1.87
TRM112YNR046W YJL213WP40896 331 aa3.38□□□□□ -1.87
TRM112YNR046W CHS6P40955 746 aa3.38□□□□□ -1.87
TRM112YNR046W COS10P52924 374 aa3.38□□□□□ -1.87
TRM112YNR046W YMR181CQ03231 154 aa3.38□□□□□ -1.87
TRM112YNR046W DBP9Q06218 594 aaKnown RBP3.38□□□□□ -1.87
TRM112YNR046W IPK1Q06667 281 aa3.38□□□□□ -1.87
TRM112YNR046W SRL2Q12020 392 aa3.38□□□□□ -1.87
TRM112YNR046W RAD61Q99359 647 aa3.38□□□□□ -1.87
TRM112YNR046W STF1P01098 86 aa3.37□□□□□ -1.87
TRM112YNR046W HEM2P05373 342 aa3.37□□□□□ -1.87
TRM112YNR046W GDH1P07262 454 aaKnown RBP3.37□□□□□ -1.87
TRM112YNR046W IMA3P0CW40 589 aa3.37□□□□□ -1.87
TRM112YNR046W IMA4P0CW41 589 aa3.37□□□□□ -1.87
TRM112YNR046W CPR1P14832 162 aaKnown RBP3.37□□□□□ -1.87
TRM112YNR046W MCK1P21965 375 aaKnown RBP3.37□□□□□ -1.87
TRM112YNR046W SLM5P25345 492 aaKnown RBP3.37□□□□□ -1.87
TRM112YNR046W FAA1P30624 700 aaKnown RBP3.37□□□□□ -1.87
TRM112YNR046W ATS1P31386 333 aa3.37□□□□□ -1.87
TRM112YNR046W YSC83P32792 385 aa3.37□□□□□ -1.87
TRM112YNR046W MRP4P32902 394 aa3.37□□□□□ -1.87
TRM112YNR046W SKN1P33336 771 aa3.37□□□□□ -1.87
TRM112YNR046W KKQ8P36004 724 aa3.37□□□□□ -1.87
TRM112YNR046W YBP1P38315 674 aa3.37□□□□□ -1.87
TRM112YNR046W MMF1P40185 145 aaKnown RBP3.37□□□□□ -1.87
TRM112YNR046W FYV8P46949 817 aaKnown RBP3.37□□□□□ -1.87
TRM112YNR046W SNT309Q06091 175 aaPredicted RBP3.37□□□□□ -1.87
TRM112YNR046W IMA2Q08295 589 aa3.37□□□□□ -1.87
TRM112YNR046W PPT2Q12036 173 aa3.37□□□□□ -1.87
TRM112YNR046W TIP41Q12199 356 aa3.37□□□□□ -1.87
TRM112YNR046W TPT1Q12272 230 aaKnown RBP3.37□□□□□ -1.87
TRM112YNR046W CEX1Q12453 761 aa3.37□□□□□ -1.87
TRM112YNR046W RRP12Q12754 1228 aaKnown RBP3.37□□□□□ -1.87
TRM112YNR046W SLY1P22213 666 aa3.36□□□□□ -1.87
TRM112YNR046W UBA1P22515 1024 aaKnown RBP3.36□□□□□ -1.87
TRM112YNR046W ITR1P30605 584 aa3.36□□□□□ -1.87
TRM112YNR046W YEL043WP32618 956 aa3.36□□□□□ -1.87
TRM112YNR046W COX13P32799 129 aa3.36□□□□□ -1.87
TRM112YNR046W ADH5P38113 351 aaKnown RBP3.36□□□□□ -1.87
TRM112YNR046W MIX23P38162 196 aa3.36□□□□□ -1.87
TRM112YNR046W POP2P39008 433 aa3.36□□□□□ -1.87
TRM112YNR046W FAA2P39518 744 aa3.36□□□□□ -1.87
TRM112YNR046W YAT2P40017 923 aa3.36□□□□□ -1.87
TRM112YNR046W MKT1P40850 830 aaKnown RBP3.36□□□□□ -1.87
TRM112YNR046W YFL067WP43537 175 aa3.36□□□□□ -1.87
TRM112YNR046W RPA34P47006 233 aaPredicted RBP3.36□□□□□ -1.87
TRM112YNR046W RTT102P53330 157 aa3.36□□□□□ -1.87
TRM112YNR046W PRP3Q03338 469 aaPredicted RBP3.36□□□□□ -1.87
TRM112YNR046W AAD15Q08361 143 aa3.36□□□□□ -1.87
TRM112YNR046W ATP1P07251 545 aaKnown RBP3.35□□□□□ -1.87
TRM112YNR046W ARF1P11076 181 aaKnown RBP3.35□□□□□ -1.87
TRM112YNR046W RDS1P25611 832 aa3.35□□□□□ -1.87
TRM112YNR046W LOS1P33418 1100 aaPredicted RBP3.35□□□□□ -1.87
TRM112YNR046W DOA1P36037 715 aa3.35□□□□□ -1.87
TRM112YNR046W YIL089WP40500 205 aa3.35□□□□□ -1.87
TRM112YNR046W SFH5P47008 294 aa3.35□□□□□ -1.87
TRM112YNR046W YDL186WP48568 277 aa3.35□□□□□ -1.87
TRM112YNR046W AZR1P50080 613 aa3.35□□□□□ -1.87
TRM112YNR046W CUE3P53137 624 aaKnown RBP3.35□□□□□ -1.87
TRM112YNR046W MSO1P53604 210 aaKnown RBP3.35□□□□□ -1.87
TRM112YNR046W GOR1P53839 350 aa3.35□□□□□ -1.87
TRM112YNR046W AQR1P53943 586 aa3.35□□□□□ -1.87
TRM112YNR046W URC2Q04411 772 aa3.35□□□□□ -1.87
TRM112YNR046W YMR317WQ04893 1140 aa3.35□□□□□ -1.87
TRM112YNR046W SNX3Q08826 162 aaKnown RBP3.35□□□□□ -1.87
TRM112YNR046W YLR108CQ12259 485 aa3.35□□□□□ -1.87
TRM112YNR046W HEM15P16622 393 aa3.34□□□□□ -1.87
TRM112YNR046W RGT1P32862 1170 aa3.34□□□□□ -1.87
TRM112YNR046W SPT10P35208 640 aa3.34□□□□□ -1.87
TRM112YNR046W STP2P38704 541 aa3.34□□□□□ -1.87
TRM112YNR046W MTC6P38849 526 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms