RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL1, Length 840 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL1	YNL289W	PDB1	P32473	366 aa	Known RBP	4.6	□□□□□ -1.67
PCL1	YNL289W	KAR9	P32526	644 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	YBP1	P38315	674 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	UBA4	P38820	440 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	AIM18	P38884	321 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	SMF1	P38925	575 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	END3	P39013	349 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	ERP2	P39704	215 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	YEL028W	P39989	153 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	SER33	P40510	469 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	SIP4	P46954	829 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	YML6	P51998	286 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	VAC7	P53950	1165 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	YMR160W	Q03823	816 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	URH1	Q04179	340 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	RPC11	Q04307	110 aa	Predicted RBP	4.6	□□□□□ -1.67
PCL1	YNL289W	ERV41	Q04651	352 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	SML1	Q04964	104 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	SWC7	Q06707	132 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	ENT4	Q07872	247 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	PER33	Q12144	273 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	YDR018C	Q12185	396 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	YLR046C	Q12253	270 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	GPM3	Q12326	303 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	AFI1	Q99222	893 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	MSB2	P32334	1306 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	TOR1	P35169	2470 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	COX5A	P00424	153 aa		4.59	□□□□□ -1.67
PCL1	YNL289W	PWP1	P21304	576 aa	Known RBP	4.59	□□□□□ -1.67
PCL1	YNL289W	DAL81	P21657	970 aa		4.59	□□□□□ -1.67
PCL1	YNL289W	GEX1	P25596	615 aa		4.59	□□□□□ -1.67
PCL1	YNL289W	TRS65	P32893	560 aa		4.59	□□□□□ -1.67
PCL1	YNL289W	MSG5	P38590	489 aa		4.59	□□□□□ -1.67
PCL1	YNL289W	OTU2	P38747	307 aa	Known RBP	4.59	□□□□□ -1.67
PCL1	YNL289W	CAJ1	P39101	391 aa		4.59	□□□□□ -1.67
PCL1	YNL289W	RGI2	P40188	164 aa		4.59	□□□□□ -1.67
PCL1	YNL289W	YJR061W	P40355	935 aa		4.59	□□□□□ -1.67
PCL1	YNL289W	PAN6	P40459	309 aa		4.59	□□□□□ -1.67
PCL1	YNL289W	CWC22	P53333	577 aa	Known RBP	4.59	□□□□□ -1.67
PCL1	YNL289W	IMP4	P53941	290 aa	Known RBP	4.59	□□□□□ -1.67
PCL1	YNL289W	INP2	Q03824	705 aa		4.59	□□□□□ -1.67
PCL1	YNL289W	YDR415C	Q04033	374 aa	Predicted RBP	4.59	□□□□□ -1.67
PCL1	YNL289W	PMS1	P14242	873 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	FPR1	P20081	114 aa	Known RBP	4.58	□□□□□ -1.68
PCL1	YNL289W	SRB4	P32569	687 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	RML2	P32611	393 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	SPC34	P36131	295 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	MRPL40	P36534	297 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	RIM2	P38127	377 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	YJL070C	P40361	888 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	DPH1	P40487	425 aa	Known RBP	4.58	□□□□□ -1.68
PCL1	YNL289W	PYK2	P52489	506 aa	Known RBP	4.58	□□□□□ -1.68
PCL1	YNL289W	AQR1	P53943	586 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	HEL2	Q05580	639 aa	Known RBP	4.58	□□□□□ -1.68
PCL1	YNL289W	PSR1	Q07800	427 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	YLR012C	Q07927	99 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	RDR1	Q08904	546 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	NKP1	Q12493	238 aa		4.58	□□□□□ -1.68
PCL1	YNL289W	EFG1	Q3E705	233 aa	Known RBP	4.58	□□□□□ -1.68
PCL1	YNL289W	SEN1	Q00416	2231 aa	Known RBP	4.57	□□□□□ -1.68
PCL1	YNL289W	RAD3	P06839	778 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	MRPL8	P22353	238 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	TRX2	P22803	104 aa	Known RBP	4.57	□□□□□ -1.68
PCL1	YNL289W	AAT2	P23542	418 aa	Known RBP	4.57	□□□□□ -1.68
PCL1	YNL289W	RBK1	P25332	333 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	PHD1	P36093	366 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	TCD2	P36101	447 aa	Known RBP	4.57	□□□□□ -1.68
PCL1	YNL289W	TSC10	P38342	320 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	WSC4	P38739	605 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	ELO1	P39540	310 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	YMR134W	P40207	237 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	DLD2	P46681	530 aa	Known RBP	4.57	□□□□□ -1.68
PCL1	YNL289W	AIM23	P47015	356 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	FLC3	P53121	802 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	YNL247W	P53852	767 aa	Known RBP	4.57	□□□□□ -1.68
PCL1	YNL289W	TDA7	P53882	636 aa	Predicted RBP	4.57	□□□□□ -1.68
PCL1	YNL289W	VPS9	P54787	451 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	GRX8	Q05926	109 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	YLL056C	Q12177	298 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	PEX11	Q12462	236 aa		4.57	□□□□□ -1.68
PCL1	YNL289W	CDC24	P11433	854 aa	Predicted RBP	4.56	□□□□□ -1.68
PCL1	YNL289W	PXA2	P34230	853 aa		4.56	□□□□□ -1.68
PCL1	YNL289W	MMS21	P38632	267 aa		4.56	□□□□□ -1.68
PCL1	YNL289W	TIM17	P39515	158 aa		4.56	□□□□□ -1.68
PCL1	YNL289W	YNL320W	P42840	284 aa		4.56	□□□□□ -1.68
PCL1	YNL289W	RPC17	P47076	161 aa		4.56	□□□□□ -1.68
PCL1	YNL289W	TCB2	P48231	1178 aa		4.56	□□□□□ -1.68
PCL1	YNL289W	MRX6	P48564	524 aa		4.56	□□□□□ -1.68
PCL1	YNL289W	DIA3	P52290	468 aa		4.56	□□□□□ -1.68
PCL1	YNL289W	PRM1	P53835	661 aa		4.56	□□□□□ -1.68
PCL1	YNL289W	RTT103	Q05543	409 aa		4.56	□□□□□ -1.68
PCL1	YNL289W	SEY1	Q99287	776 aa		4.56	□□□□□ -1.68
PCL1	YNL289W	TEF1	P02994	458 aa	Known RBP	4.55	□□□□□ -1.68
PCL1	YNL289W	PUT2	P07275	575 aa		4.55	□□□□□ -1.68
PCL1	YNL289W	FUM1	P08417	488 aa	Known RBP	4.55	□□□□□ -1.68
PCL1	YNL289W	CLN1	P20437	546 aa		4.55	□□□□□ -1.68
PCL1	YNL289W	ERG1	P32476	496 aa	Known RBP	4.55	□□□□□ -1.68
PCL1	YNL289W	RAD5	P32849	1169 aa	Predicted RBP	4.55	□□□□□ -1.68
PCL1	YNL289W	VHC1	P38329	1120 aa		4.55	□□□□□ -1.68
PCL1	YNL289W	TAE1	P38340	232 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms