RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A PHO2P07269 559 aa3.32□□□□□ -1.88
YSF3YNL138W-A DFR1P07807 211 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
YSF3YNL138W-A AMD1P15274 810 aaKnown RBP3.32□□□□□ -1.88
YSF3YNL138W-A VPS3P23643 1011 aa3.32□□□□□ -1.88
YSF3YNL138W-A YCL042WP25572 119 aa3.32□□□□□ -1.88
YSF3YNL138W-A FRE1P32791 686 aa3.32□□□□□ -1.88
YSF3YNL138W-A MSN2P33748 704 aa3.32□□□□□ -1.88
YSF3YNL138W-A BNA4P38169 460 aa3.32□□□□□ -1.88
YSF3YNL138W-A TCM62P38228 572 aaKnown RBP3.32□□□□□ -1.88
YSF3YNL138W-A DHH1P39517 506 aaKnown RBP3.32□□□□□ -1.88
YSF3YNL138W-A ALK1P43633 760 aaKnown RBP3.32□□□□□ -1.88
YSF3YNL138W-A COQ5P49017 307 aa3.32□□□□□ -1.88
YSF3YNL138W-A NUP84P52891 726 aa3.32□□□□□ -1.88
YSF3YNL138W-A BNI5P53890 448 aaKnown RBP3.32□□□□□ -1.88
YSF3YNL138W-A RPM2Q02773 1202 aa3.32□□□□□ -1.88
YSF3YNL138W-A YDR239CQ03780 787 aa3.32□□□□□ -1.88
YSF3YNL138W-A SYO1Q07395 620 aa3.32□□□□□ -1.88
YSF3YNL138W-A SHS1Q07657 551 aa3.32□□□□□ -1.88
YSF3YNL138W-A COX3P00420 269 aa3.31□□□□□ -1.88
YSF3YNL138W-A PRP2P20095 876 aaPredicted RBP3.31□□□□□ -1.88
YSF3YNL138W-A OCA4P25366 362 aa3.31□□□□□ -1.88
YSF3YNL138W-A BUD14P27637 709 aa3.31□□□□□ -1.88
YSF3YNL138W-A RPN12P32496 274 aa3.31□□□□□ -1.88
YSF3YNL138W-A NDC1P32500 655 aa3.31□□□□□ -1.88
YSF3YNL138W-A COT1P32798 439 aa3.31□□□□□ -1.88
YSF3YNL138W-A PTR2P32901 601 aa3.31□□□□□ -1.88
YSF3YNL138W-A CCT4P39078 528 aaKnown RBP3.31□□□□□ -1.88
YSF3YNL138W-A HEM14P40012 539 aa3.31□□□□□ -1.88
YSF3YNL138W-A MET28P40573 187 aa3.31□□□□□ -1.88
YSF3YNL138W-A RTT101P47050 842 aa3.31□□□□□ -1.88
YSF3YNL138W-A SWS2P53937 143 aa3.31□□□□□ -1.88
YSF3YNL138W-A FIN1Q03898 291 aa3.31□□□□□ -1.88
YSF3YNL138W-A PRM6Q04705 352 aa3.31□□□□□ -1.88
YSF3YNL138W-A IVY1Q04934 453 aa3.31□□□□□ -1.88
YSF3YNL138W-A COG4Q06096 861 aa3.31□□□□□ -1.88
YSF3YNL138W-A PHO92Q06390 306 aa3.31□□□□□ -1.88
YSF3YNL138W-A COR1P07256 457 aa3.3□□□□□ -1.88
YSF3YNL138W-A TCP1P12612 559 aaKnown RBP3.3□□□□□ -1.88
YSF3YNL138W-A YCR022CP25620 114 aa3.3□□□□□ -1.88
YSF3YNL138W-A PAP1P29468 568 aaKnown RBP3.3□□□□□ -1.88
YSF3YNL138W-A MRE11P32829 692 aa3.3□□□□□ -1.88
YSF3YNL138W-A LOS1P33418 1100 aaPredicted RBP3.3□□□□□ -1.88
YSF3YNL138W-A MMS4P38257 691 aa3.3□□□□□ -1.88
YSF3YNL138W-A KRE9P39005 276 aa3.3□□□□□ -1.88
YSF3YNL138W-A NDE1P40215 560 aa3.3□□□□□ -1.88
YSF3YNL138W-A RPR2P40571 144 aa3.3□□□□□ -1.88
YSF3YNL138W-A NCS2P53923 493 aaPredicted RBP3.3□□□□□ -1.88
YSF3YNL138W-A AQR1P53943 586 aa3.3□□□□□ -1.88
YSF3YNL138W-A RSM10Q03201 203 aa3.3□□□□□ -1.88
YSF3YNL138W-A TRM82Q03774 444 aa3.3□□□□□ -1.88
YSF3YNL138W-A BNA5Q05979 453 aa3.3□□□□□ -1.88
YSF3YNL138W-A YOR387CQ08910 206 aa3.3□□□□□ -1.88
YSF3YNL138W-A CAR1P00812 333 aaKnown RBP3.29□□□□□ -1.88
YSF3YNL138W-A MES1P00958 751 aaKnown RBP3.29□□□□□ -1.88
YSF3YNL138W-A YCR007CP25354 239 aa3.29□□□□□ -1.88
YSF3YNL138W-A SAS3P34218 831 aa3.29□□□□□ -1.88
YSF3YNL138W-A ATG12P38316 186 aa3.29□□□□□ -1.88
YSF3YNL138W-A MTC4P38335 694 aaKnown RBP3.29□□□□□ -1.88
YSF3YNL138W-A MDM31P38880 579 aa3.29□□□□□ -1.88
YSF3YNL138W-A MBB1P39534 108 aa3.29□□□□□ -1.88
YSF3YNL138W-A CIS3P47001 227 aa3.29□□□□□ -1.88
YSF3YNL138W-A ARK1P53974 638 aa3.29□□□□□ -1.88
YSF3YNL138W-A YML096WQ04489 525 aa3.29□□□□□ -1.88
YSF3YNL138W-A RTT103Q05543 409 aa3.29□□□□□ -1.88
YSF3YNL138W-A MRPL51Q06090 140 aaPredicted RBP3.29□□□□□ -1.88
YSF3YNL138W-A TAF10Q12030 206 aa3.29□□□□□ -1.88
YSF3YNL138W-A YDL009CQ12210 107 aa3.29□□□□□ -1.88
YSF3YNL138W-A AYT1Q12226 474 aa3.29□□□□□ -1.88
YSF3YNL138W-A YDR061WQ12298 539 aa3.29□□□□□ -1.88
YSF3YNL138W-A PGA3Q12746 312 aaKnown RBP3.29□□□□□ -1.88
YSF3YNL138W-A YDL007C-AQ2V2Q0 85 aa3.29□□□□□ -1.88
YSF3YNL138W-A YBR298C-AQ8TGK4 73 aa3.29□□□□□ -1.88
YSF3YNL138W-A GDH1P07262 454 aaKnown RBP3.28□□□□□ -1.88
YSF3YNL138W-A HSC82P15108 705 aaKnown RBP3.28□□□□□ -1.88
YSF3YNL138W-A PRP16P15938 1071 aaPredicted RBP3.28□□□□□ -1.88
YSF3YNL138W-A AGA1P32323 725 aa3.28□□□□□ -1.88
YSF3YNL138W-A SPC110P32380 944 aa3.28□□□□□ -1.88
YSF3YNL138W-A TKL2P33315 681 aa3.28□□□□□ -1.88
YSF3YNL138W-A MUM2P38236 366 aa3.28□□□□□ -1.88
YSF3YNL138W-A YHR054CP38780 354 aa3.28□□□□□ -1.88
YSF3YNL138W-A RPH1P39956 796 aa3.28□□□□□ -1.88
YSF3YNL138W-A AVT2P39981 480 aa3.28□□□□□ -1.88
YSF3YNL138W-A FLC3P53121 802 aa3.28□□□□□ -1.88
YSF3YNL138W-A GPI1P53306 609 aa3.28□□□□□ -1.88
YSF3YNL138W-A PGA2P53903 129 aa3.28□□□□□ -1.88
YSF3YNL138W-A GPM2Q12008 311 aa3.28□□□□□ -1.88
YSF3YNL138W-A SET6Q12529 373 aa3.28□□□□□ -1.88
YSF3YNL138W-A NAG1Q8TGN9 163 aa3.28□□□□□ -1.88
YSF3YNL138W-A INH1P01097 85 aa3.27□□□□□ -1.89
YSF3YNL138W-A MET17P06106 444 aa3.27□□□□□ -1.89
YSF3YNL138W-A RPL31BP0C2H9 113 aaKnown RBP3.27□□□□□ -1.89
YSF3YNL138W-A MCK1P21965 375 aaKnown RBP3.27□□□□□ -1.89
YSF3YNL138W-A PMT1P33775 817 aa3.27□□□□□ -1.89
YSF3YNL138W-A MET18P40469 1032 aa3.27□□□□□ -1.89
YSF3YNL138W-A YJL213WP40896 331 aa3.27□□□□□ -1.89
YSF3YNL138W-A ARF3P40994 183 aaRIP-Chip data3.27□□□□□ -1.89not detected
YSF3YNL138W-A YGL138CP53122 345 aa3.27□□□□□ -1.89
YSF3YNL138W-A IRC15Q02733 499 aa3.27□□□□□ -1.89
YSF3YNL138W-A CSM3Q04659 317 aa3.27□□□□□ -1.89
YSF3YNL138W-A ERP1Q05359 219 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms