RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C RIB4P50861 169 aaPredicted RBP3.61□□□□□ -1.83
SSO2YMR183C CGR1P53188 120 aa3.61□□□□□ -1.83
SSO2YMR183C RTT102P53330 157 aa3.61□□□□□ -1.83
SSO2YMR183C YNL050CP53952 270 aa3.61□□□□□ -1.83
SSO2YMR183C YVH1Q02256 364 aaKnown RBP3.61□□□□□ -1.83
SSO2YMR183C STD1Q02794 444 aa3.61□□□□□ -1.83
SSO2YMR183C YMR102CQ03177 834 aa3.61□□□□□ -1.83
SSO2YMR183C CAB5Q03941 241 aa3.61□□□□□ -1.83
SSO2YMR183C RRN11Q04712 507 aa3.61□□□□□ -1.83
SSO2YMR183C MDM30Q05930 598 aa3.61□□□□□ -1.83
SSO2YMR183C RRG8Q06109 277 aa3.61□□□□□ -1.83
SSO2YMR183C ARR1Q06596 294 aa3.61□□□□□ -1.83
SSO2YMR183C MRPL35Q06678 367 aa3.61□□□□□ -1.83
SSO2YMR183C MDM36Q06820 579 aa3.61□□□□□ -1.83
SSO2YMR183C TSR1Q07381 788 aaKnown RBP3.61□□□□□ -1.83
SSO2YMR183C YLL007CQ07799 665 aa3.61□□□□□ -1.83
SSO2YMR183C RKM1Q08961 583 aaPredicted RBP3.61□□□□□ -1.83
SSO2YMR183C BUD4P47136 1447 aa3.61□□□□□ -1.83
SSO2YMR183C ADE4P04046 510 aaKnown RBP3.6□□□□□ -1.83
SSO2YMR183C PRB1P09232 635 aa3.6□□□□□ -1.83
SSO2YMR183C MRP2P10663 115 aaPredicted RBP3.6□□□□□ -1.83
SSO2YMR183C ATP10P18496 279 aa3.6□□□□□ -1.83
SSO2YMR183C HXT2P23585 541 aa3.6□□□□□ -1.83
SSO2YMR183C SUA5P32579 426 aa3.6□□□□□ -1.83
SSO2YMR183C SPR1P32603 445 aa3.6□□□□□ -1.83
SSO2YMR183C YSC83P32792 385 aa3.6□□□□□ -1.83
SSO2YMR183C REC114P32841 428 aa3.6□□□□□ -1.83
SSO2YMR183C PAD1P33751 242 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SSO2YMR183C MTR2P34232 184 aaKnown RBP3.6□□□□□ -1.83
SSO2YMR183C BNA4P38169 460 aa3.6□□□□□ -1.83
SSO2YMR183C QDR3P38227 689 aa3.6□□□□□ -1.83
SSO2YMR183C ALP1P38971 573 aa3.6□□□□□ -1.83
SSO2YMR183C YAT2P40017 923 aa3.6□□□□□ -1.83
SSO2YMR183C YER034WP40022 185 aaKnown RBP3.6□□□□□ -1.83
SSO2YMR183C PAC11P40960 533 aa3.6□□□□□ -1.83
SSO2YMR183C TES1P41903 349 aaKnown RBP3.6□□□□□ -1.83
SSO2YMR183C SNG1P46950 547 aa3.6□□□□□ -1.83
SSO2YMR183C VPS25P47142 202 aa3.6□□□□□ -1.83
SSO2YMR183C RAD17P48581 401 aa3.6□□□□□ -1.83
SSO2YMR183C UBP8P50102 471 aa3.6□□□□□ -1.83
SSO2YMR183C DUG3P53871 357 aa3.6□□□□□ -1.83
SSO2YMR183C YNL134CP53912 376 aaKnown RBP3.6□□□□□ -1.83
SSO2YMR183C SWF1Q04629 336 aa3.6□□□□□ -1.83
SSO2YMR183C YMR034CQ05131 434 aaPredicted RBP3.6□□□□□ -1.83
SSO2YMR183C YLR049CQ12110 428 aa3.6□□□□□ -1.83
SSO2YMR183C DCP1Q12517 231 aaPredicted RBP3.6□□□□□ -1.83
SSO2YMR183C SPO24Q3E752 67 aa3.6□□□□□ -1.83
SSO2YMR183C CDC21P06785 304 aa3.59□□□□□ -1.83
SSO2YMR183C GPA1P08539 472 aa3.59□□□□□ -1.83
SSO2YMR183C YFL068WP0CX99 160 aa3.59□□□□□ -1.83
SSO2YMR183C YLL066W-AP0CY00 160 aa3.59□□□□□ -1.83
SSO2YMR183C YLL067W-AP0CY01 160 aa3.59□□□□□ -1.83
SSO2YMR183C SAR1P20606 190 aaKnown RBP3.59□□□□□ -1.83
SSO2YMR183C YCR006CP25350 157 aa3.59□□□□□ -1.83
SSO2YMR183C SMY1P32364 656 aaKnown RBP3.59□□□□□ -1.83
SSO2YMR183C CBF5P33322 483 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SSO2YMR183C BMH2P34730 273 aaKnown RBP3.59□□□□□ -1.83
SSO2YMR183C SOR1P35497 357 aaKnown RBP3.59□□□□□ -1.83
SSO2YMR183C INM1P38710 295 aa3.59□□□□□ -1.83
SSO2YMR183C RRP4P38792 359 aaKnown RBP3.59□□□□□ -1.83
SSO2YMR183C PET100P38958 111 aa3.59□□□□□ -1.83
SSO2YMR183C RCY1P39531 840 aa3.59□□□□□ -1.83
SSO2YMR183C PCL6P40038 420 aa3.59□□□□□ -1.83
SSO2YMR183C SCC4P40090 624 aa3.59□□□□□ -1.83
SSO2YMR183C POP1P41812 875 aa3.59□□□□□ -1.83
SSO2YMR183C TFG2P41896 400 aaPredicted RBP3.59□□□□□ -1.83
SSO2YMR183C TOS3P43637 560 aa3.59□□□□□ -1.83
SSO2YMR183C YTP1P53584 459 aa3.59□□□□□ -1.83
SSO2YMR183C PET117Q02771 107 aa3.59□□□□□ -1.83
SSO2YMR183C CAC2Q04199 468 aa3.59□□□□□ -1.83
SSO2YMR183C SOR2Q07786 357 aa3.59□□□□□ -1.83
SSO2YMR183C NSE1Q07913 336 aa3.59□□□□□ -1.83
SSO2YMR183C RUP1Q12242 671 aa3.59□□□□□ -1.83
SSO2YMR183C GLE1Q12315 538 aa3.59□□□□□ -1.83
SSO2YMR183C BRR1Q99177 341 aaPredicted RBP3.59□□□□□ -1.83
SSO2YMR183C MDS3P53094 1487 aa3.59□□□□□ -1.84
SSO2YMR183C REV3P14284 1504 aa3.59□□□□□ -1.84
SSO2YMR183C CHO1P08456 276 aa3.58□□□□□ -1.84
SSO2YMR183C RPL42AP0CX27 106 aaKnown RBP3.58□□□□□ -1.84
SSO2YMR183C RPL42BP0CX28 106 aaKnown RBP3.58□□□□□ -1.84
SSO2YMR183C TYR1P20049 452 aa3.58□□□□□ -1.84
SSO2YMR183C MEK1P24719 497 aaPredicted RBP3.58□□□□□ -1.84
SSO2YMR183C MGR1P25573 417 aa3.58□□□□□ -1.84
SSO2YMR183C SAC1P32368 623 aaKnown RBP3.58□□□□□ -1.84
SSO2YMR183C PRS1P32895 427 aaKnown RBP3.58□□□□□ -1.84
SSO2YMR183C BUD2P33314 1104 aa3.58□□□□□ -1.84
SSO2YMR183C YKL023WP36103 277 aaKnown RBP3.58□□□□□ -1.84
SSO2YMR183C CBP4P37267 147 aa3.58□□□□□ -1.84
SSO2YMR183C MET30P39014 640 aa3.58□□□□□ -1.84
SSO2YMR183C PRP39P39682 629 aaKnown RBP3.58□□□□□ -1.84
SSO2YMR183C RTR1P40084 226 aaPredicted RBP3.58□□□□□ -1.84
SSO2YMR183C GAT2P40209 560 aa3.58□□□□□ -1.84
SSO2YMR183C SNL1P40548 159 aa3.58□□□□□ -1.84
SSO2YMR183C ZPR1P53303 486 aaKnown RBP3.58□□□□□ -1.84
SSO2YMR183C APC4Q04601 652 aa3.58□□□□□ -1.84
SSO2YMR183C PLP2Q12017 286 aa3.58□□□□□ -1.84
SSO2YMR183C FMP16Q12497 93 aa3.58□□□□□ -1.84
SSO2YMR183C CFT1Q06632 1357 aaKnown RBP3.58□□□□□ -1.84
SSO2YMR183C RPL24AP04449 155 aaKnown RBP3.57□□□□□ -1.84
SSO2YMR183C ARG80P07249 177 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms