RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C SNX3Q08826 162 aaKnown RBP1.91□□□□□ -2.1
SGD1YLR336C BUG1Q12191 341 aa1.91□□□□□ -2.1
SGD1YLR336C ATG34Q12292 412 aa1.91□□□□□ -2.1
SGD1YLR336C ALG1P16661 449 aa1.9□□□□□ -2.1
SGD1YLR336C NCA3P46955 337 aa1.9□□□□□ -2.1
SGD1YLR336C AZR1P50080 613 aa1.9□□□□□ -2.1
SGD1YLR336C RHO5P53879 331 aaKnown RBP1.9□□□□□ -2.1
SGD1YLR336C ERV2Q12284 196 aa1.9□□□□□ -2.1
SGD1YLR336C DPH2P32461 534 aa1.9□□□□□ -2.11
SGD1YLR336C KKQ8P36004 724 aa1.9□□□□□ -2.11
SGD1YLR336C AVT5P38176 459 aa1.9□□□□□ -2.11
SGD1YLR336C GDI1P39958 451 aaKnown RBP1.9□□□□□ -2.11
SGD1YLR336C SIM1P40472 476 aa1.9□□□□□ -2.11
SGD1YLR336C YJL055WP47044 245 aa1.9□□□□□ -2.11
SGD1YLR336C ESA1Q08649 445 aa1.9□□□□□ -2.11
SGD1YLR336C YOR387CQ08910 206 aa1.9□□□□□ -2.11
SGD1YLR336C YLR108CQ12259 485 aa1.9□□□□□ -2.11
SGD1YLR336C NAT1P12945 854 aaKnown RBP1.89□□□□□ -2.11
SGD1YLR336C SPS22P25380 463 aa1.89□□□□□ -2.11
SGD1YLR336C CYS4P32582 507 aaKnown RBP1.89□□□□□ -2.11
SGD1YLR336C JEM1P40358 645 aa1.89□□□□□ -2.11
SGD1YLR336C PRM5P40476 318 aa1.89□□□□□ -2.11
SGD1YLR336C ROG1P53118 685 aa1.89□□□□□ -2.11
SGD1YLR336C TOF1P53840 1238 aa1.89□□□□□ -2.11
SGD1YLR336C ELP3Q02908 557 aaKnown RBP1.89□□□□□ -2.11
SGD1YLR336C ERO1Q03103 563 aa1.89□□□□□ -2.11
SGD1YLR336C TSR1Q07381 788 aaKnown RBP1.89□□□□□ -2.11
SGD1YLR336C CYC3P06182 269 aa1.89□□□□□ -2.11
SGD1YLR336C RPS8AP0CX39 200 aaKnown RBP1.89□□□□□ -2.11
SGD1YLR336C RPS8BP0CX40 200 aaKnown RBP1.89□□□□□ -2.11
SGD1YLR336C NAM9P27929 486 aa1.89□□□□□ -2.11
SGD1YLR336C PFF1P38244 976 aa1.89□□□□□ -2.11
SGD1YLR336C RXT2P38255 430 aa1.89□□□□□ -2.11
SGD1YLR336C MTC6P38849 526 aa1.89□□□□□ -2.11
SGD1YLR336C PCF11P39081 626 aaPredicted RBP1.89□□□□□ -2.11
SGD1YLR336C YER079WP40052 210 aaKnown RBP1.89□□□□□ -2.11
SGD1YLR336C WWM1P43582 211 aaKnown RBP1.89□□□□□ -2.11
SGD1YLR336C PIB2P53191 635 aa1.89□□□□□ -2.11
SGD1YLR336C MTM1P53320 366 aa1.89□□□□□ -2.11
SGD1YLR336C MEH1Q02205 184 aa1.89□□□□□ -2.11
SGD1YLR336C SXM1Q04175 944 aaKnown RBP1.89□□□□□ -2.11
SGD1YLR336C PBA1Q05778 276 aa1.89□□□□□ -2.11
SGD1YLR336C RRP9Q06506 573 aaKnown RBP1.89□□□□□ -2.11
SGD1YLR336C TMS1Q12116 473 aa1.89□□□□□ -2.11
SGD1YLR336C NFT1P0CE68 1218 aa1.89□□□□□ -2.11
SGD1YLR336C JLP2P40206 208 aa1.89□□□□□ -2.11
SGD1YLR336C SEC28P40509 296 aaKnown RBP1.89□□□□□ -2.11
SGD1YLR336C SPG5P42933 373 aa1.89□□□□□ -2.11
SGD1YLR336C STD1Q02794 444 aa1.89□□□□□ -2.11
SGD1YLR336C BCH1Q05029 724 aa1.89□□□□□ -2.11
SGD1YLR336C MRPL35Q06678 367 aa1.89□□□□□ -2.11
SGD1YLR336C TRP1P00912 224 aa1.88□□□□□ -2.11
SGD1YLR336C CBS2P14905 389 aa1.88□□□□□ -2.11
SGD1YLR336C YSC83P32792 385 aa1.88□□□□□ -2.11
SGD1YLR336C YBR056WP38081 501 aa1.88□□□□□ -2.11
SGD1YLR336C OLA1P38219 394 aaKnown RBP1.88□□□□□ -2.11
SGD1YLR336C QDR3P38227 689 aa1.88□□□□□ -2.11
SGD1YLR336C INM1P38710 295 aa1.88□□□□□ -2.11
SGD1YLR336C MLH1P38920 769 aa1.88□□□□□ -2.11
SGD1YLR336C HSP82P02829 709 aaKnown RBP1.88□□□□□ -2.11
SGD1YLR336C CDC21P06785 304 aa1.88□□□□□ -2.11
SGD1YLR336C DST1P07273 309 aa1.88□□□□□ -2.11
SGD1YLR336C SPT15P13393 240 aaKnown RBP1.88□□□□□ -2.11
SGD1YLR336C MUD1P32605 298 aaKnown RBP1.88□□□□□ -2.11
SGD1YLR336C YBL059WP34224 193 aa1.88□□□□□ -2.11
SGD1YLR336C NDT80P38830 627 aa1.88□□□□□ -2.11
SGD1YLR336C TOS2P50078 622 aa1.88□□□□□ -2.11
SGD1YLR336C PEX25Q02969 394 aa1.88□□□□□ -2.11
SGD1YLR336C MMT1Q03218 510 aa1.88□□□□□ -2.11
SGD1YLR336C SMA2Q04658 369 aa1.88□□□□□ -2.11
SGD1YLR336C ECM7Q06200 448 aa1.88□□□□□ -2.11
SGD1YLR336C NDL1Q06568 189 aa1.88□□□□□ -2.11
SGD1YLR336C RNH203Q12338 110 aa1.88□□□□□ -2.11
SGD1YLR336C YRM1Q12340 786 aa1.88□□□□□ -2.11
SGD1YLR336C OPI3P05375 206 aa1.87□□□□□ -2.11
SGD1YLR336C PDE2P06776 526 aa1.87□□□□□ -2.11
SGD1YLR336C PHO91P27514 894 aa1.87□□□□□ -2.11
SGD1YLR336C DEG1P31115 442 aaKnown RBP1.87□□□□□ -2.11
SGD1YLR336C HSP104P31539 908 aaKnown RBP1.87□□□□□ -2.11
SGD1YLR336C MSG5P38590 489 aa1.87□□□□□ -2.11
SGD1YLR336C YPI1P43587 155 aa1.87□□□□□ -2.11
SGD1YLR336C SFH5P47008 294 aa1.87□□□□□ -2.11
SGD1YLR336C PMT5P52867 743 aa1.87□□□□□ -2.11
SGD1YLR336C COS1P53822 381 aa1.87□□□□□ -2.11
SGD1YLR336C CCE1Q03702 353 aa1.87□□□□□ -2.11
SGD1YLR336C RCF1Q03713 159 aa1.87□□□□□ -2.11
SGD1YLR336C RRN11Q04712 507 aa1.87□□□□□ -2.11
SGD1YLR336C SCW10Q04951 389 aa1.87□□□□□ -2.11
SGD1YLR336C TPT1Q12272 230 aaKnown RBP1.87□□□□□ -2.11
SGD1YLR336C YCL068CP25593 260 aa1.87□□□□□ -2.11
SGD1YLR336C NRP1P32770 719 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
SGD1YLR336C SKN1P33336 771 aa1.87□□□□□ -2.11
SGD1YLR336C SDH3P33421 198 aa1.87□□□□□ -2.11
SGD1YLR336C YIP5P53108 310 aa1.87□□□□□ -2.11
SGD1YLR336C NSE1Q07913 336 aa1.87□□□□□ -2.11
SGD1YLR336C RUP1Q12242 671 aa1.87□□□□□ -2.11
SGD1YLR336C CHK1P38147 527 aa1.86□□□□□ -2.11
SGD1YLR336C PTH1P38876 190 aaKnown RBP1.86□□□□□ -2.11
SGD1YLR336C REE1P40893 198 aa1.86□□□□□ -2.11
SGD1YLR336C TOS3P43637 560 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms