RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC42	YKL042W	RMD5	Q12508	421 aa		4.92	□□□□□ -1.62
SPC42	YKL042W	RPL20A	P0CX23	172 aa	Known RBP	4.91	□□□□□ -1.62
SPC42	YKL042W	RPL20B	P0CX24	172 aa	Predicted RBP	4.91	□□□□□ -1.62
SPC42	YKL042W	PRP16	P15938	1071 aa	Predicted RBP	4.91	□□□□□ -1.62
SPC42	YKL042W	CDC23	P16522	626 aa		4.91	□□□□□ -1.62
SPC42	YKL042W	YBR056W	P38081	501 aa		4.91	□□□□□ -1.62
SPC42	YKL042W	MTC4	P38335	694 aa	Known RBP	4.91	□□□□□ -1.62
SPC42	YKL042W	RTT107	P38850	1070 aa		4.91	□□□□□ -1.62
SPC42	YKL042W	NAS2	P40555	220 aa		4.91	□□□□□ -1.62
SPC42	YKL042W	RRT5	P43607	289 aa		4.91	□□□□□ -1.62
SPC42	YKL042W	PDR16	P53860	351 aa	Known RBP	4.91	□□□□□ -1.62
SPC42	YKL042W	MMT1	Q03218	510 aa		4.91	□□□□□ -1.62
SPC42	YKL042W	YAP7	Q08182	245 aa		4.91	□□□□□ -1.62
SPC42	YKL042W	TIM18	Q08749	192 aa		4.91	□□□□□ -1.62
SPC42	YKL042W	PKH2	Q12236	1081 aa	Known RBP	4.91	□□□□□ -1.62
SPC42	YKL042W	NBL1	Q3E7Y6	73 aa		4.91	□□□□□ -1.62
SPC42	YKL042W	TEF1	P02994	458 aa	Known RBP	4.9	□□□□□ -1.63
SPC42	YKL042W	SCH9	P11792	824 aa	Known RBP	4.9	□□□□□ -1.63
SPC42	YKL042W	SPO12	P17123	173 aa		4.9	□□□□□ -1.63
SPC42	YKL042W	SEC1	P30619	724 aa	Known RBP	4.9	□□□□□ -1.63
SPC42	YKL042W	PMU1	P36069	295 aa		4.9	□□□□□ -1.63
SPC42	YKL042W	YIL089W	P40500	205 aa		4.9	□□□□□ -1.63
SPC42	YKL042W	YNL143C	P53908	130 aa		4.9	□□□□□ -1.63
SPC42	YKL042W	AQR1	P53943	586 aa		4.9	□□□□□ -1.63
SPC42	YKL042W	ADA2	Q02336	434 aa		4.9	□□□□□ -1.63
SPC42	YKL042W	STD1	Q02794	444 aa		4.9	□□□□□ -1.63
SPC42	YKL042W	YPL199C	Q08954	240 aa		4.9	□□□□□ -1.63
SPC42	YKL042W	REX3	Q12090	404 aa		4.9	□□□□□ -1.63
SPC42	YKL042W	RPL15A	P05748	204 aa	Known RBP	4.89	□□□□□ -1.63
SPC42	YKL042W	SAM1	P10659	382 aa	Known RBP	4.89	□□□□□ -1.63
SPC42	YKL042W	ATR1	P13090	542 aa		4.89	□□□□□ -1.63
SPC42	YKL042W	SAM2	P19358	384 aa	Known RBP	4.89	□□□□□ -1.63
SPC42	YKL042W	MST28	P39552	234 aa		4.89	□□□□□ -1.63
SPC42	YKL042W	LAM5	P43560	674 aa		4.89	□□□□□ -1.63
SPC42	YKL042W	YPL068C	Q02749	293 aa		4.89	□□□□□ -1.63
SPC42	YKL042W	RRP9	Q06506	573 aa	Known RBP	4.89	□□□□□ -1.63
SPC42	YKL042W	SRL2	Q12020	392 aa		4.89	□□□□□ -1.63
SPC42	YKL042W	DAP1	Q12091	152 aa		4.89	□□□□□ -1.63
SPC42	YKL042W	SET6	Q12529	373 aa		4.89	□□□□□ -1.63
SPC42	YKL042W	TAL1	P15019	335 aa	Known RBP	4.88	□□□□□ -1.63
SPC42	YKL042W	PUT3	P25502	979 aa	Predicted RBP	4.88	□□□□□ -1.63
SPC42	YKL042W	SPP381	P38282	291 aa	Predicted RBP	4.88	□□□□□ -1.63
SPC42	YKL042W	DHH1	P39517	506 aa	Known RBP	4.88	□□□□□ -1.63
SPC42	YKL042W	MMF1	P40185	145 aa	Known RBP	4.88	□□□□□ -1.63
SPC42	YKL042W	YJL070C	P40361	888 aa		4.88	□□□□□ -1.63
SPC42	YKL042W	RPR2	P40571	144 aa		4.88	□□□□□ -1.63
SPC42	YKL042W	RPA34	P47006	233 aa	Predicted RBP	4.88	□□□□□ -1.63
SPC42	YKL042W	YNR068C	P53754	272 aa		4.88	□□□□□ -1.63
SPC42	YKL042W	CAF40	P53829	373 aa		4.88	□□□□□ -1.63
SPC42	YKL042W	NUP53	Q03790	475 aa		4.88	□□□□□ -1.63
SPC42	YKL042W	ERP1	Q05359	219 aa	Known RBP	4.88	□□□□□ -1.63
SPC42	YKL042W	AYT1	Q12226	474 aa		4.88	□□□□□ -1.63
SPC42	YKL042W	RNH203	Q12338	110 aa		4.88	□□□□□ -1.63
SPC42	YKL042W	SLM5	P25345	492 aa	Known RBP	4.87	□□□□□ -1.63
SPC42	YKL042W	ITR1	P30605	584 aa		4.87	□□□□□ -1.63
SPC42	YKL042W	ATS1	P31386	333 aa		4.87	□□□□□ -1.63
SPC42	YKL042W	RGT1	P32862	1170 aa		4.87	□□□□□ -1.63
SPC42	YKL042W	SHE4	P51534	789 aa		4.87	□□□□□ -1.63
SPC42	YKL042W	RTT102	P53330	157 aa		4.87	□□□□□ -1.63
SPC42	YKL042W	MPS1	P54199	764 aa		4.87	□□□□□ -1.63
SPC42	YKL042W	UTP6	Q02354	440 aa	Known RBP	4.87	□□□□□ -1.63
SPC42	YKL042W	SPH1	Q06160	661 aa		4.87	□□□□□ -1.63
SPC42	YKL042W	GRS2	Q06817	618 aa		4.87	□□□□□ -1.63
SPC42	YKL042W	OPI3	P05375	206 aa		4.86	□□□□□ -1.63
SPC42	YKL042W	RDS1	P25611	832 aa		4.86	□□□□□ -1.63
SPC42	YKL042W	SKN1	P33336	771 aa		4.86	□□□□□ -1.63
SPC42	YKL042W	KKQ8	P36004	724 aa		4.86	□□□□□ -1.63
SPC42	YKL042W	YBL028C	P38202	106 aa		4.86	□□□□□ -1.63
SPC42	YKL042W	RPH1	P39956	796 aa		4.86	□□□□□ -1.63
SPC42	YKL042W	YFR016C	P43597	1233 aa	Known RBP	4.86	□□□□□ -1.63
SPC42	YKL042W	EFM3	P47163	339 aa		4.86	□□□□□ -1.63
SPC42	YKL042W	LSC1	P53598	329 aa	Known RBP	4.86	□□□□□ -1.63
SPC42	YKL042W	URC2	Q04411	772 aa		4.86	□□□□□ -1.63
SPC42	YKL042W	ECM7	Q06200	448 aa		4.86	□□□□□ -1.63
SPC42	YKL042W	AAD15	Q08361	143 aa		4.86	□□□□□ -1.63
SPC42	YKL042W	SFG1	Q12507	346 aa		4.86	□□□□□ -1.63
SPC42	YKL042W	STE3	P06783	470 aa		4.85	□□□□□ -1.63
SPC42	YKL042W	RPL12A	P0CX53	165 aa	Known RBP	4.85	□□□□□ -1.63
SPC42	YKL042W	RPL12B	P0CX54	165 aa		4.85	□□□□□ -1.63
SPC42	YKL042W	TMT1	P32643	299 aa		4.85	□□□□□ -1.63
SPC42	YKL042W	ATP3	P38077	311 aa	Known RBP	4.85	□□□□□ -1.63
SPC42	YKL042W	MSG5	P38590	489 aa		4.85	□□□□□ -1.63
SPC42	YKL042W	PRM1	P53835	661 aa		4.85	□□□□□ -1.63
SPC42	YKL042W	PRP3	Q03338	469 aa	Predicted RBP	4.85	□□□□□ -1.63
SPC42	YKL042W	RAD61	Q99359	647 aa		4.85	□□□□□ -1.63
SPC42	YKL042W	HEM2	P05373	342 aa		4.84	□□□□□ -1.63
SPC42	YKL042W	SLY1	P22213	666 aa		4.84	□□□□□ -1.63
SPC42	YKL042W	PSO2	P30620	661 aa		4.84	□□□□□ -1.63
SPC42	YKL042W	RIB5	P38145	238 aa		4.84	□□□□□ -1.63
SPC42	YKL042W	YHR177W	P38867	453 aa		4.84	□□□□□ -1.63
SPC42	YKL042W	MDM31	P38880	579 aa		4.84	□□□□□ -1.63
SPC42	YKL042W	AZR1	P50080	613 aa		4.84	□□□□□ -1.63
SPC42	YKL042W	YMR181C	Q03231	154 aa		4.84	□□□□□ -1.63
SPC42	YKL042W	COX13	P32799	129 aa		4.83	□□□□□ -1.64
SPC42	YKL042W	YKL097C	P34245	136 aa		4.83	□□□□□ -1.64
SPC42	YKL042W	PMT5	P52867	743 aa		4.83	□□□□□ -1.64
SPC42	YKL042W	MPS2	P53159	387 aa		4.83	□□□□□ -1.64
SPC42	YKL042W	RRB1	Q04225	511 aa	Known RBP	4.83	□□□□□ -1.64
SPC42	YKL042W	MGR3	Q04472	501 aa		4.83	□□□□□ -1.64
SPC42	YKL042W	SMA2	Q04658	369 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms