RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W YIP5P53108 310 aa3.27□□□□□ -1.89
SWD2YKL018W CUE3P53137 624 aaKnown RBP3.27□□□□□ -1.89
SWD2YKL018W IRC15Q02733 499 aa3.27□□□□□ -1.89
SWD2YKL018W GIP3Q03016 1276 aa3.27□□□□□ -1.89
SWD2YKL018W YDR541CQ03049 344 aa3.27□□□□□ -1.89
SWD2YKL018W YMR087WQ04299 284 aa3.27□□□□□ -1.89
SWD2YKL018W SMA2Q04658 369 aa3.27□□□□□ -1.89
SWD2YKL018W MRPL51Q06090 140 aaPredicted RBP3.27□□□□□ -1.89
SWD2YKL018W ARV1Q06541 321 aa3.27□□□□□ -1.89
SWD2YKL018W YFH1Q07540 174 aa3.27□□□□□ -1.89
SWD2YKL018W PML1Q07930 204 aaPredicted RBP3.27□□□□□ -1.89
SWD2YKL018W REX3Q12090 404 aa3.27□□□□□ -1.89
SWD2YKL018W YLL056CQ12177 298 aa3.27□□□□□ -1.89
SWD2YKL018W RUD3Q12234 484 aaKnown RBP3.27□□□□□ -1.89
SWD2YKL018W COX3P00420 269 aa3.26□□□□□ -1.89
SWD2YKL018W CDC21P06785 304 aa3.26□□□□□ -1.89
SWD2YKL018W YAR066WP0CX18 203 aa3.26□□□□□ -1.89
SWD2YKL018W YHR214WP0CX19 203 aa3.26□□□□□ -1.89
SWD2YKL018W MER1P16523 270 aa3.26□□□□□ -1.89
SWD2YKL018W ALG1P16661 449 aa3.26□□□□□ -1.89
SWD2YKL018W PET123P17558 318 aa3.26□□□□□ -1.89
SWD2YKL018W RPL5P26321 297 aaKnown RBP3.26□□□□□ -1.89
SWD2YKL018W HSP104P31539 908 aaKnown RBP3.26□□□□□ -1.89
SWD2YKL018W SMY1P32364 656 aaKnown RBP3.26□□□□□ -1.89
SWD2YKL018W SPC110P32380 944 aa3.26□□□□□ -1.89
SWD2YKL018W ARC19P33204 171 aaKnown RBP3.26□□□□□ -1.89
SWD2YKL018W SIP2P34164 415 aaKnown RBP3.26□□□□□ -1.89
SWD2YKL018W YCR041WP37265 110 aa3.26□□□□□ -1.89
SWD2YKL018W MNL1P38888 796 aa3.26□□□□□ -1.89
SWD2YKL018W BFR1P38934 470 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SWD2YKL018W RTT105P40063 208 aa3.26□□□□□ -1.89
SWD2YKL018W AIM20P40451 204 aa3.26□□□□□ -1.89
SWD2YKL018W GCD10P41814 478 aa3.26□□□□□ -1.89
SWD2YKL018W HMS2P47175 358 aa3.26□□□□□ -1.89
SWD2YKL018W RAD17P48581 401 aa3.26□□□□□ -1.89
SWD2YKL018W SHE10P53075 577 aa3.26□□□□□ -1.89
SWD2YKL018W ALF1P53904 254 aa3.26□□□□□ -1.89
SWD2YKL018W AQR1P53943 586 aa3.26□□□□□ -1.89
SWD2YKL018W CWC21Q03375 135 aaKnown RBP3.26□□□□□ -1.89
SWD2YKL018W HCR1Q05775 265 aaKnown RBP3.26□□□□□ -1.89
SWD2YKL018W SPH1Q06160 661 aa3.26□□□□□ -1.89
SWD2YKL018W BUG1Q12191 341 aa3.26□□□□□ -1.89
SWD2YKL018W YDL009CQ12210 107 aa3.26□□□□□ -1.89
SWD2YKL018W PSY3Q12318 242 aa3.26□□□□□ -1.89
SWD2YKL018W RRP36Q12481 300 aaPredicted RBP3.26□□□□□ -1.89
SWD2YKL018W MCK1P21965 375 aaKnown RBP3.25□□□□□ -1.89
SWD2YKL018W MRPL25P23369 157 aa3.25□□□□□ -1.89
SWD2YKL018W RAD57P25301 460 aa3.25□□□□□ -1.89
SWD2YKL018W DAL80P26343 269 aa3.25□□□□□ -1.89
SWD2YKL018W ATS1P31386 333 aa3.25□□□□□ -1.89
SWD2YKL018W CYS4P32582 507 aaKnown RBP3.25□□□□□ -1.89
SWD2YKL018W FRE2P36033 711 aa3.25□□□□□ -1.89
SWD2YKL018W RPC37P36121 282 aa3.25□□□□□ -1.89
SWD2YKL018W AVT5P38176 459 aa3.25□□□□□ -1.89
SWD2YKL018W KAP104P38217 918 aaKnown RBP3.25□□□□□ -1.89
SWD2YKL018W GPI16P38875 610 aa3.25□□□□□ -1.89
SWD2YKL018W STN1P38960 494 aa3.25□□□□□ -1.89
SWD2YKL018W PCL7P40186 285 aa3.25□□□□□ -1.89
SWD2YKL018W GAT2P40209 560 aa3.25□□□□□ -1.89
SWD2YKL018W BRO1P48582 844 aa3.25□□□□□ -1.89
SWD2YKL018W ASN2P49090 572 aaKnown RBP3.25□□□□□ -1.89
SWD2YKL018W YIP1P53039 248 aa3.25□□□□□ -1.89
SWD2YKL018W PDR16P53860 351 aaKnown RBP3.25□□□□□ -1.89
SWD2YKL018W RPM2Q02773 1202 aa3.25□□□□□ -1.89
SWD2YKL018W PNG1Q02890 363 aa3.25□□□□□ -1.89
SWD2YKL018W RLI1Q03195 608 aaKnown RBP3.25□□□□□ -1.89
SWD2YKL018W TAF12Q03761 539 aa3.25□□□□□ -1.89
SWD2YKL018W ERP1Q05359 219 aaKnown RBP3.25□□□□□ -1.89
SWD2YKL018W BNA5Q05979 453 aa3.25□□□□□ -1.89
SWD2YKL018W VPS74Q06385 345 aa3.25□□□□□ -1.89
SWD2YKL018W NDL1Q06568 189 aa3.25□□□□□ -1.89
SWD2YKL018W SYO1Q07395 620 aa3.25□□□□□ -1.89
SWD2YKL018W RUP1Q12242 671 aa3.25□□□□□ -1.89
SWD2YKL018W YRM1Q12340 786 aa3.25□□□□□ -1.89
SWD2YKL018W SRN2Q99176 213 aa3.25□□□□□ -1.89
SWD2YKL018W NFT1P0CE68 1218 aa3.24□□□□□ -1.89
SWD2YKL018W RPL20AP0CX23 172 aaKnown RBP3.24□□□□□ -1.89
SWD2YKL018W RPL20BP0CX24 172 aaPredicted RBP3.24□□□□□ -1.89
SWD2YKL018W REV1P12689 985 aa3.24□□□□□ -1.89
SWD2YKL018W UBA1P22515 1024 aaKnown RBP3.24□□□□□ -1.89
SWD2YKL018W FAA1P30624 700 aaKnown RBP3.24□□□□□ -1.89
SWD2YKL018W NRP1P32770 719 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
SWD2YKL018W MTC4P38335 694 aaKnown RBP3.24□□□□□ -1.89
SWD2YKL018W TIF5P38431 405 aaKnown RBP3.24□□□□□ -1.89
SWD2YKL018W INM1P38710 295 aa3.24□□□□□ -1.89
SWD2YKL018W YER034WP40022 185 aaKnown RBP3.24□□□□□ -1.89
SWD2YKL018W YER079WP40052 210 aaKnown RBP3.24□□□□□ -1.89
SWD2YKL018W RPR2P40571 144 aa3.24□□□□□ -1.89
SWD2YKL018W LAM5P43560 674 aa3.24□□□□□ -1.89
SWD2YKL018W HST1P53685 503 aa3.24□□□□□ -1.89
SWD2YKL018W SMD2Q06217 110 aaKnown RBP3.24□□□□□ -1.89
SWD2YKL018W NBL1Q3E7Y6 73 aa3.24□□□□□ -1.89
SWD2YKL018W DST1P07273 309 aa3.23□□□□□ -1.89
SWD2YKL018W TAL1P15019 335 aaKnown RBP3.23□□□□□ -1.89
SWD2YKL018W AMD1P15274 810 aaKnown RBP3.23□□□□□ -1.89
SWD2YKL018W RPB4P20433 221 aaPredicted RBP3.23□□□□□ -1.89
SWD2YKL018W YCR100CP25606 316 aa3.23□□□□□ -1.89
SWD2YKL018W NDI1P32340 513 aa3.23□□□□□ -1.89
SWD2YKL018W YSC83P32792 385 aa3.23□□□□□ -1.89
SWD2YKL018W YBR056WP38081 501 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms