RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A PSY3Q12318 242 aa2.83□□□□□ -1.96
SFT1YKL006C-A RPL1AP0CX43 217 aaKnown RBP2.82□□□□□ -1.96
SFT1YKL006C-A RPL1BP0CX44 217 aaKnown RBP2.82□□□□□ -1.96
SFT1YKL006C-A ISY1P21374 235 aaPredicted RBP2.82□□□□□ -1.96
SFT1YKL006C-A PPH22P23595 377 aa2.82□□□□□ -1.96
SFT1YKL006C-A SPB1P25582 841 aaPredicted RBP2.82□□□□□ -1.96
SFT1YKL006C-A YEL043WP32618 956 aa2.82□□□□□ -1.96
SFT1YKL006C-A GYP6P32806 458 aa2.82□□□□□ -1.96
SFT1YKL006C-A MNS1P32906 549 aa2.82□□□□□ -1.96
SFT1YKL006C-A HCS1P34243 683 aa2.82□□□□□ -1.96
SFT1YKL006C-A YSW1P38280 609 aa2.82□□□□□ -1.96
SFT1YKL006C-A SER3P40054 469 aa2.82□□□□□ -1.96
SFT1YKL006C-A RPS0BP46654 252 aaKnown RBP2.82□□□□□ -1.96
SFT1YKL006C-A YNR068CP53754 272 aa2.82□□□□□ -1.96
SFT1YKL006C-A YLR152CP54072 576 aa2.82□□□□□ -1.96
SFT1YKL006C-A ADA2Q02336 434 aa2.82□□□□□ -1.96
SFT1YKL006C-A YDR387CQ04162 555 aa2.82□□□□□ -1.96
SFT1YKL006C-A TAP42Q04372 366 aa2.82□□□□□ -1.96
SFT1YKL006C-A YLR456WQ06199 204 aa2.82□□□□□ -1.96
SFT1YKL006C-A PML1Q07930 204 aaPredicted RBP2.82□□□□□ -1.96
SFT1YKL006C-A SIL1Q08199 421 aa2.82□□□□□ -1.96
SFT1YKL006C-A PKH2Q12236 1081 aaKnown RBP2.82□□□□□ -1.96
SFT1YKL006C-A DAP2P18962 818 aa2.81□□□□□ -1.96
SFT1YKL006C-A PHO84P25297 587 aaKnown RBP2.81□□□□□ -1.96
SFT1YKL006C-A DAD2P36162 133 aa2.81□□□□□ -1.96
SFT1YKL006C-A MST28P39552 234 aa2.81□□□□□ -1.96
SFT1YKL006C-A PAN6P40459 309 aa2.81□□□□□ -1.96
SFT1YKL006C-A YIF1P53845 314 aaKnown RBP2.81□□□□□ -1.96
SFT1YKL006C-A PDR16P53860 351 aaKnown RBP2.81□□□□□ -1.96
SFT1YKL006C-A HER2Q03557 464 aa2.81□□□□□ -1.96
SFT1YKL006C-A ACL4Q03771 387 aa2.81□□□□□ -1.96
SFT1YKL006C-A DBP9Q06218 594 aaKnown RBP2.81□□□□□ -1.96
SFT1YKL006C-A DCI1Q08558 271 aa2.81□□□□□ -1.96
SFT1YKL006C-A TIM18Q08749 192 aa2.81□□□□□ -1.96
SFT1YKL006C-A CLN1P20437 546 aa2.8□□□□□ -1.96
SFT1YKL006C-A TIP1P27654 210 aaPredicted RBP2.8□□□□□ -1.96
SFT1YKL006C-A APE2P32454 952 aaKnown RBP2.8□□□□□ -1.96
SFT1YKL006C-A NIP100P33420 868 aa2.8□□□□□ -1.96
SFT1YKL006C-A PCL7P40186 285 aa2.8□□□□□ -1.96
SFT1YKL006C-A ECM27P47144 725 aa2.8□□□□□ -1.96
SFT1YKL006C-A SHE4P51534 789 aa2.8□□□□□ -1.96
SFT1YKL006C-A SHY1P53266 389 aa2.8□□□□□ -1.96
SFT1YKL006C-A CWC22P53333 577 aaKnown RBP2.8□□□□□ -1.96
SFT1YKL006C-A RHO5P53879 331 aaKnown RBP2.8□□□□□ -1.96
SFT1YKL006C-A PRO2P54885 456 aaKnown RBP2.8□□□□□ -1.96
SFT1YKL006C-A SKO1Q02100 647 aa2.8□□□□□ -1.96
SFT1YKL006C-A PPM1Q04081 328 aa2.8□□□□□ -1.96
SFT1YKL006C-A YMR027WQ04371 470 aa2.8□□□□□ -1.96
SFT1YKL006C-A HSP31Q04432 237 aa2.8□□□□□ -1.96
SFT1YKL006C-A RRP45Q05636 305 aaKnown RBP2.8□□□□□ -1.96
SFT1YKL006C-A YPR022CQ12139 1133 aa2.8□□□□□ -1.96
SFT1YKL006C-A RBD2Q12270 262 aa2.8□□□□□ -1.96
SFT1YKL006C-A RAD61Q99359 647 aa2.8□□□□□ -1.96
SFT1YKL006C-A URA4P20051 364 aa2.79□□□□□ -1.96
SFT1YKL006C-A SLY1P22213 666 aa2.79□□□□□ -1.96
SFT1YKL006C-A RPI1P23250 407 aaKnown RBP2.79□□□□□ -1.96
SFT1YKL006C-A PCH2P38126 564 aa2.79□□□□□ -1.96
SFT1YKL006C-A CHS6P40955 746 aa2.79□□□□□ -1.96
SFT1YKL006C-A TOM22P49334 152 aa2.79□□□□□ -1.96
SFT1YKL006C-A YGL138CP53122 345 aa2.79□□□□□ -1.96
SFT1YKL006C-A KTR5P53966 522 aaPredicted RBP2.79□□□□□ -1.96
SFT1YKL006C-A HXT11P54862 567 aa2.79□□□□□ -1.96
SFT1YKL006C-A SPH1Q06160 661 aa2.79□□□□□ -1.96
SFT1YKL006C-A VPS54Q12071 889 aa2.79□□□□□ -1.96
SFT1YKL006C-A WTM1Q12363 437 aaKnown RBP2.79□□□□□ -1.96
SFT1YKL006C-A RPC40P07703 335 aaKnown RBP2.78□□□□□ -1.96
SFT1YKL006C-A SPS4P09937 338 aa2.78□□□□□ -1.96
SFT1YKL006C-A ECM25P32525 599 aa2.78□□□□□ -1.96
SFT1YKL006C-A SUR1P33300 382 aa2.78□□□□□ -1.96
SFT1YKL006C-A NTC20P38302 140 aaPredicted RBP2.78□□□□□ -1.96
SFT1YKL006C-A WSS1P38838 269 aa2.78□□□□□ -1.96
SFT1YKL006C-A MLH1P38920 769 aa2.78□□□□□ -1.96
SFT1YKL006C-A OSW5P40219 148 aa2.78□□□□□ -1.96
SFT1YKL006C-A TFG2P41896 400 aaPredicted RBP2.78□□□□□ -1.96
SFT1YKL006C-A COS5P47187 383 aa2.78□□□□□ -1.96
SFT1YKL006C-A MLC1P53141 149 aa2.78□□□□□ -1.96
SFT1YKL006C-A HST1P53685 503 aa2.78□□□□□ -1.96
SFT1YKL006C-A FRE4P53746 719 aa2.78□□□□□ -1.96
SFT1YKL006C-A CWC25P53854 179 aaKnown RBP2.78□□□□□ -1.96
SFT1YKL006C-A ERV25P54837 211 aaKnown RBP2.78□□□□□ -1.96
SFT1YKL006C-A MGR3Q04472 501 aa2.78□□□□□ -1.96
SFT1YKL006C-A COS7Q07788 383 aa2.78□□□□□ -1.96
SFT1YKL006C-A RRD2Q12461 358 aa2.78□□□□□ -1.96
SFT1YKL006C-A RRP36Q12481 300 aaPredicted RBP2.78□□□□□ -1.96
SFT1YKL006C-A ARO3P14843 370 aaKnown RBP2.77□□□□□ -1.97
SFT1YKL006C-A SPO7P18410 259 aa2.77□□□□□ -1.97
SFT1YKL006C-A PRP21P32524 280 aaPredicted RBP2.77□□□□□ -1.97
SFT1YKL006C-A SPR1P32603 445 aa2.77□□□□□ -1.97
SFT1YKL006C-A PRS1P32895 427 aaKnown RBP2.77□□□□□ -1.97
SFT1YKL006C-A RIB7P33312 244 aa2.77□□□□□ -1.97
SFT1YKL006C-A ARA1P38115 344 aa2.77□□□□□ -1.97
SFT1YKL006C-A FAD1P38913 306 aa2.77□□□□□ -1.97
SFT1YKL006C-A RTT105P40063 208 aa2.77□□□□□ -1.97
SFT1YKL006C-A CUE3P53137 624 aaKnown RBP2.77□□□□□ -1.97
SFT1YKL006C-A RPT4P53549 437 aaKnown RBP2.77□□□□□ -1.97
SFT1YKL006C-A YMR130WQ04223 302 aa2.77□□□□□ -1.97
SFT1YKL006C-A DCS1Q06151 350 aa2.77□□□□□ -1.97
SFT1YKL006C-A NOP6Q07623 225 aaKnown RBP2.77□□□□□ -1.97
SFT1YKL006C-A SNX3Q08826 162 aaKnown RBP2.77□□□□□ -1.97
SFT1YKL006C-A VAM3Q12241 283 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms