RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W RRD2Q12461 358 aa2.15□□□□□ -2.07
RPL40AYIL148W HHF1P02309 103 aaKnown RBP2.14□□□□□ -2.07
RPL40AYIL148W ATP1P07251 545 aaKnown RBP2.14□□□□□ -2.07
RPL40AYIL148W PRP16P15938 1071 aaPredicted RBP2.14□□□□□ -2.07
RPL40AYIL148W HEM15P16622 393 aa2.14□□□□□ -2.07
RPL40AYIL148W ALG1P16661 449 aa2.14□□□□□ -2.07
RPL40AYIL148W ATS1P31386 333 aa2.14□□□□□ -2.07
RPL40AYIL148W AGA1P32323 725 aa2.14□□□□□ -2.07
RPL40AYIL148W PUP2P32379 260 aa2.14□□□□□ -2.07
RPL40AYIL148W MUD1P32605 298 aaKnown RBP2.14□□□□□ -2.07
RPL40AYIL148W NRP1P32770 719 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
RPL40AYIL148W SDH3P33421 198 aa2.14□□□□□ -2.07
RPL40AYIL148W PAD1P33751 242 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
RPL40AYIL148W DAD2P36162 133 aa2.14□□□□□ -2.07
RPL40AYIL148W INM1P38710 295 aa2.14□□□□□ -2.07
RPL40AYIL148W APE4P38821 490 aa2.14□□□□□ -2.07
RPL40AYIL148W YAL037WP39728 267 aa2.14□□□□□ -2.07
RPL40AYIL148W OST1P41543 476 aaKnown RBP2.14□□□□□ -2.07
RPL40AYIL148W TOM22P49334 152 aa2.14□□□□□ -2.07
RPL40AYIL148W ATP22P50273 684 aaPredicted RBP2.14□□□□□ -2.07
RPL40AYIL148W COS10P52924 374 aa2.14□□□□□ -2.07
RPL40AYIL148W ROG1P53118 685 aa2.14□□□□□ -2.07
RPL40AYIL148W MLC1P53141 149 aa2.14□□□□□ -2.07
RPL40AYIL148W MSO1P53604 210 aaKnown RBP2.14□□□□□ -2.07
RPL40AYIL148W STD1Q02794 444 aa2.14□□□□□ -2.07
RPL40AYIL148W YDR541CQ03049 344 aa2.14□□□□□ -2.07
RPL40AYIL148W RPN9Q04062 393 aaKnown RBP2.14□□□□□ -2.07
RPL40AYIL148W ESA1Q08649 445 aa2.14□□□□□ -2.07
RPL40AYIL148W HNT3Q08702 217 aa2.14□□□□□ -2.07
RPL40AYIL148W RRP12Q12754 1228 aaKnown RBP2.14□□□□□ -2.07
RPL40AYIL148W YBR298C-AQ8TGK4 73 aa2.14□□□□□ -2.07
RPL40AYIL148W SRN2Q99176 213 aa2.14□□□□□ -2.07
RPL40AYIL148W RAD61Q99359 647 aa2.14□□□□□ -2.07
RPL40AYIL148W ARO3P14843 370 aaKnown RBP2.13□□□□□ -2.07
RPL40AYIL148W PHO84P25297 587 aaKnown RBP2.13□□□□□ -2.07
RPL40AYIL148W CTR86P25355 563 aa2.13□□□□□ -2.07
RPL40AYIL148W MSP1P28737 362 aa2.13□□□□□ -2.07
RPL40AYIL148W DEG1P31115 442 aaKnown RBP2.13□□□□□ -2.07
RPL40AYIL148W YBL059WP34224 193 aa2.13□□□□□ -2.07
RPL40AYIL148W DOA1P36037 715 aa2.13□□□□□ -2.07
RPL40AYIL148W MIX23P38162 196 aa2.13□□□□□ -2.07
RPL40AYIL148W PFF1P38244 976 aa2.13□□□□□ -2.07
RPL40AYIL148W NDT80P38830 627 aa2.13□□□□□ -2.07
RPL40AYIL148W MNL1P38888 796 aa2.13□□□□□ -2.07
RPL40AYIL148W PAC11P40960 533 aa2.13□□□□□ -2.07
RPL40AYIL148W RRT5P43607 289 aa2.13□□□□□ -2.07
RPL40AYIL148W SFH5P47008 294 aa2.13□□□□□ -2.07
RPL40AYIL148W AZR1P50080 613 aa2.13□□□□□ -2.07
RPL40AYIL148W RRP46P53256 223 aaPredicted RBP2.13□□□□□ -2.07
RPL40AYIL148W YDR341CQ05506 607 aaKnown RBP2.13□□□□□ -2.07
RPL40AYIL148W RRP9Q06506 573 aaKnown RBP2.13□□□□□ -2.07
RPL40AYIL148W NSE1Q07913 336 aa2.13□□□□□ -2.07
RPL40AYIL148W THP3Q12049 470 aaKnown RBP2.13□□□□□ -2.07
RPL40AYIL148W TPT1Q12272 230 aaKnown RBP2.13□□□□□ -2.07
RPL40AYIL148W FRE6Q12473 712 aa2.13□□□□□ -2.07
RPL40AYIL148W HTZ1Q12692 134 aaKnown RBP2.13□□□□□ -2.07
RPL40AYIL148W NFT1P0CE68 1218 aa2.12□□□□□ -2.07
RPL40AYIL148W NAM2P11325 894 aa2.12□□□□□ -2.07
RPL40AYIL148W RRP7P25368 297 aaPredicted RBP2.12□□□□□ -2.07
RPL40AYIL148W YCL068CP25593 260 aa2.12□□□□□ -2.07
RPL40AYIL148W GEX1P25596 615 aa2.12□□□□□ -2.07
RPL40AYIL148W CPR3P25719 182 aa2.12□□□□□ -2.07
RPL40AYIL148W SKN1P33336 771 aa2.12□□□□□ -2.07
RPL40AYIL148W MRPL4P36517 319 aa2.12□□□□□ -2.07
RPL40AYIL148W PTH1P38876 190 aaKnown RBP2.12□□□□□ -2.07
RPL40AYIL148W STN1P38960 494 aa2.12□□□□□ -2.07
RPL40AYIL148W FAA2P39518 744 aa2.12□□□□□ -2.07
RPL40AYIL148W ATM1P40416 690 aa2.12□□□□□ -2.07
RPL40AYIL148W ASN2P49090 572 aaKnown RBP2.12□□□□□ -2.07
RPL40AYIL148W ARK1P53974 638 aa2.12□□□□□ -2.07
RPL40AYIL148W HER2Q03557 464 aa2.12□□□□□ -2.07
RPL40AYIL148W YMR010WQ03687 405 aa2.12□□□□□ -2.07
RPL40AYIL148W URH1Q04179 340 aa2.12□□□□□ -2.07
RPL40AYIL148W YFH1Q07540 174 aa2.12□□□□□ -2.07
RPL40AYIL148W SMF3Q12078 473 aaPredicted RBP2.12□□□□□ -2.07
RPL40AYIL148W NCA2Q12374 616 aa2.12□□□□□ -2.07
RPL40AYIL148W RMD5Q12508 421 aa2.12□□□□□ -2.07
RPL40AYIL148W TFB5Q3E7C1 72 aaPredicted RBP2.12□□□□□ -2.07
RPL40AYIL148W ILV5P06168 395 aaKnown RBP2.11□□□□□ -2.07
RPL40AYIL148W PHO2P07269 559 aa2.11□□□□□ -2.07
RPL40AYIL148W CHS1P08004 1131 aa2.11□□□□□ -2.07
RPL40AYIL148W IMA3P0CW40 589 aa2.11□□□□□ -2.07
RPL40AYIL148W IMA4P0CW41 589 aa2.11□□□□□ -2.07
RPL40AYIL148W ARF1P11076 181 aaKnown RBP2.11□□□□□ -2.07
RPL40AYIL148W CPR4P25334 318 aa2.11□□□□□ -2.07
RPL40AYIL148W MNS1P32906 549 aa2.11□□□□□ -2.07
RPL40AYIL148W SKT5P34226 696 aa2.11□□□□□ -2.07
RPL40AYIL148W CHK1P38147 527 aa2.11□□□□□ -2.07
RPL40AYIL148W COX14P39103 70 aa2.11□□□□□ -2.07
RPL40AYIL148W MAM33P40513 266 aa2.11□□□□□ -2.07
RPL40AYIL148W YIL067CP40514 678 aa2.11□□□□□ -2.07
RPL40AYIL148W YIL029CP40538 142 aa2.11□□□□□ -2.07
RPL40AYIL148W YPS6P40583 537 aa2.11□□□□□ -2.07
RPL40AYIL148W YIP5P53108 310 aa2.11□□□□□ -2.07
RPL40AYIL148W TRM112P53738 135 aaPredicted RBP2.11□□□□□ -2.07
RPL40AYIL148W SPR6Q01684 191 aa2.11□□□□□ -2.07
RPL40AYIL148W YPL107WQ02873 248 aa2.11□□□□□ -2.07
RPL40AYIL148W CCE1Q03702 353 aa2.11□□□□□ -2.07
RPL40AYIL148W BCH1Q05029 724 aa2.11□□□□□ -2.07
RPL40AYIL148W RTT103Q05543 409 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms