RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C SYP1P25623 870 aaKnown RBP5.48□□□□□ -1.53
SFB3YHR098C CTS1P29029 562 aa5.48□□□□□ -1.53
SFB3YHR098C SNC1P31109 117 aa5.48□□□□□ -1.53
SFB3YHR098C COQ2P32378 372 aa5.48□□□□□ -1.53
SFB3YHR098C RIM1P32445 135 aaKnown RBP5.48□□□□□ -1.53
SFB3YHR098C SPT10P35208 640 aa5.48□□□□□ -1.53
SFB3YHR098C SRY1P36007 326 aa5.48□□□□□ -1.53
SFB3YHR098C YHR182WP38870 785 aa5.48□□□□□ -1.53
SFB3YHR098C PIG2P40187 538 aa5.48□□□□□ -1.53
SFB3YHR098C ARF3P40994 183 aaRIP-Chip data5.48□□□□□ -1.53not detected
SFB3YHR098C ASG7P46993 209 aa5.48□□□□□ -1.53
SFB3YHR098C AVT1P47082 602 aa5.48□□□□□ -1.53
SFB3YHR098C YJR141WP47172 347 aaPredicted RBP5.48□□□□□ -1.53
SFB3YHR098C KXD1P53158 218 aa5.48□□□□□ -1.53
SFB3YHR098C SOK2P53438 785 aaPredicted RBP5.48□□□□□ -1.53
SFB3YHR098C YNR068CP53754 272 aa5.48□□□□□ -1.53
SFB3YHR098C SLM2P53955 656 aa5.48□□□□□ -1.53
SFB3YHR098C TIM44Q01852 431 aa5.48□□□□□ -1.53
SFB3YHR098C RMI1Q02685 241 aa5.48□□□□□ -1.53
SFB3YHR098C SKG3Q06315 1026 aa5.48□□□□□ -1.53
SFB3YHR098C YDL086WQ07505 273 aa5.48□□□□□ -1.53
SFB3YHR098C SLD7Q08457 257 aa5.48□□□□□ -1.53
SFB3YHR098C RRG7Q08774 242 aaPredicted RBP5.48□□□□□ -1.53
SFB3YHR098C FRE3Q08905 711 aa5.48□□□□□ -1.53
SFB3YHR098C YOR022CQ12204 715 aa5.48□□□□□ -1.53
SFB3YHR098C DCN1Q12395 269 aa5.48□□□□□ -1.53
SFB3YHR098C YKL018C-AQ3E7A7 99 aa5.48□□□□□ -1.53
SFB3YHR098C SUS1Q6WNK7 96 aa5.48□□□□□ -1.53
SFB3YHR098C TY1A-LR4P0C2I8 440 aaKnown RBP5.47□□□□□ -1.53
SFB3YHR098C YFR010W-AP0C5N0 62 aa5.47□□□□□ -1.53
SFB3YHR098C TY1A-DR6P0CX70 440 aa5.47□□□□□ -1.53
SFB3YHR098C TY1A-ER1P0CX71 440 aa5.47□□□□□ -1.53
SFB3YHR098C TY1A-LR2P0CX72 440 aa5.47□□□□□ -1.53
SFB3YHR098C TY1A-PLP0CX73 440 aa5.47□□□□□ -1.53
SFB3YHR098C TY1A-JR1P0CX74 440 aa5.47□□□□□ -1.53
SFB3YHR098C TY1A-LR3P0CX75 440 aa5.47□□□□□ -1.53
SFB3YHR098C TY1A-ML2P0CX76 440 aa5.47□□□□□ -1.53
SFB3YHR098C ATP11P32453 318 aa5.47□□□□□ -1.53
SFB3YHR098C MSN2P33748 704 aa5.47□□□□□ -1.53
SFB3YHR098C MPS3P47069 682 aa5.47□□□□□ -1.53
SFB3YHR098C AIM24P47127 394 aa5.47□□□□□ -1.53
SFB3YHR098C YPR003CP53394 754 aa5.47□□□□□ -1.53
SFB3YHR098C LSM7P53905 115 aaKnown RBP5.47□□□□□ -1.53
SFB3YHR098C PRP38Q00723 242 aaPredicted RBP5.47□□□□□ -1.53
SFB3YHR098C NHX1Q04121 633 aa5.47□□□□□ -1.53
SFB3YHR098C TY1A-GR1Q12085 440 aa5.47□□□□□ -1.53
SFB3YHR098C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.47□□□□□ -1.53
SFB3YHR098C TY1A-OLQ92392 440 aaKnown RBP5.47□□□□□ -1.53
SFB3YHR098C DBR1P24309 405 aaKnown RBP5.47□□□□□ -1.53
SFB3YHR098C BUB2P26448 306 aaPredicted RBP5.47□□□□□ -1.53
SFB3YHR098C ERT1P38140 529 aa5.47□□□□□ -1.53
SFB3YHR098C LAG1P38703 411 aa5.47□□□□□ -1.53
SFB3YHR098C DED81P38707 554 aaKnown RBP5.47□□□□□ -1.53
SFB3YHR098C YIR035CP40579 254 aa5.47□□□□□ -1.53
SFB3YHR098C YJL218WP40892 196 aaKnown RBP5.47□□□□□ -1.53
SFB3YHR098C BNA6P43619 295 aa5.47□□□□□ -1.53
SFB3YHR098C MNP1P53163 194 aaPredicted RBP5.47□□□□□ -1.53
SFB3YHR098C ARP4P80428 489 aa5.47□□□□□ -1.53
SFB3YHR098C PRM15Q03262 622 aa5.47□□□□□ -1.53
SFB3YHR098C REP2P03872 296 aa5.46□□□□□ -1.53
SFB3YHR098C MAS1P10507 462 aa5.46□□□□□ -1.53
SFB3YHR098C PPH22P23595 377 aa5.46□□□□□ -1.53
SFB3YHR098C SAT4P25333 603 aaKnown RBP5.46□□□□□ -1.53
SFB3YHR098C EMC1P25574 760 aa5.46□□□□□ -1.53
SFB3YHR098C CDC5P32562 705 aa5.46□□□□□ -1.53
SFB3YHR098C STE14P32584 239 aa5.46□□□□□ -1.53
SFB3YHR098C SHM2P37291 469 aaKnown RBP5.46□□□□□ -1.53
SFB3YHR098C NAS2P40555 220 aa5.46□□□□□ -1.53
SFB3YHR098C NIT3P49954 291 aa5.46□□□□□ -1.53
SFB3YHR098C PMT5P52867 743 aa5.46□□□□□ -1.53
SFB3YHR098C NRD1P53617 575 aaKnown RBP RIP-Chip data5.46□□□□□ -1.53not detected
SFB3YHR098C AIM36Q03798 255 aa5.46□□□□□ -1.53
SFB3YHR098C HPT1Q04178 221 aaKnown RBP5.46□□□□□ -1.53
SFB3YHR098C UTP21Q06078 939 aaPredicted RBP5.46□□□□□ -1.53
SFB3YHR098C SYT1Q06836 1226 aa5.46□□□□□ -1.53
SFB3YHR098C SCP1Q08873 200 aa5.46□□□□□ -1.53
SFB3YHR098C MHF2Q3E829 80 aa5.46□□□□□ -1.53
SFB3YHR098C CHS1P08004 1131 aa5.46□□□□□ -1.54
SFB3YHR098C CKS1P20486 150 aaKnown RBP5.46□□□□□ -1.54
SFB3YHR098C SIP1P32578 815 aa5.46□□□□□ -1.54
SFB3YHR098C PDR3P33200 976 aa5.46□□□□□ -1.54
SFB3YHR098C MBA1P38300 278 aa5.46□□□□□ -1.54
SFB3YHR098C FET3P38993 636 aa5.46□□□□□ -1.54
SFB3YHR098C FIS1P40515 155 aa5.46□□□□□ -1.54
SFB3YHR098C ERG10P41338 398 aaKnown RBP5.46□□□□□ -1.54
SFB3YHR098C YJL043WP47053 257 aa5.46□□□□□ -1.54
SFB3YHR098C YGL039WP53183 348 aaKnown RBP5.46□□□□□ -1.54
SFB3YHR098C YGL036WP53185 909 aaPredicted RBP5.46□□□□□ -1.54
SFB3YHR098C EFM5P53200 248 aaKnown RBP5.46□□□□□ -1.54
SFB3YHR098C YGR067CP53243 804 aa5.46□□□□□ -1.54
SFB3YHR098C MKC7P53379 596 aa5.46□□□□□ -1.54
SFB3YHR098C CAF120P53836 1060 aa5.46□□□□□ -1.54
SFB3YHR098C WTM1Q12363 437 aaKnown RBP5.46□□□□□ -1.54
SFB3YHR098C PNS1Q12412 539 aa5.46□□□□□ -1.54
SFB3YHR098C DFG16Q99234 619 aa5.46□□□□□ -1.54
SFB3YHR098C SLH1P53327 1967 aaKnown RBP5.46□□□□□ -1.54
SFB3YHR098C CYC1P00044 109 aaPredicted RBP5.45□□□□□ -1.54
SFB3YHR098C PHR1P05066 565 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
SFB3YHR098C RPS31P05759 152 aaKnown RBP5.45□□□□□ -1.54
SFB3YHR098C SPS2P08459 502 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms