RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C PCL6P40038 420 aa3.03□□□□□ -1.93
RPN1YHR027C FAU1P40099 211 aa3.03□□□□□ -1.93
RPN1YHR027C ICE2P40499 491 aa3.03□□□□□ -1.93
RPN1YHR027C NSE4P43124 402 aa3.03□□□□□ -1.93
RPN1YHR027C AAD10P47182 288 aa3.03□□□□□ -1.93
RPN1YHR027C SCW11P53189 542 aa3.03□□□□□ -1.93
RPN1YHR027C YGR012WP53206 393 aa3.03□□□□□ -1.93
RPN1YHR027C SHY1P53266 389 aa3.03□□□□□ -1.93
RPN1YHR027C SLM2P53955 656 aa3.03□□□□□ -1.93
RPN1YHR027C YPL071CQ02864 156 aa3.03□□□□□ -1.93
RPN1YHR027C RLI1Q03195 608 aaKnown RBP3.03□□□□□ -1.93
RPN1YHR027C UAF30Q08747 228 aa3.03□□□□□ -1.93
RPN1YHR027C APC9Q12107 265 aa3.03□□□□□ -1.93
RPN1YHR027C HSH49Q99181 213 aaPredicted RBP3.03□□□□□ -1.93
RPN1YHR027C CAR1P00812 333 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C INH1P01097 85 aa3.02□□□□□ -1.93
RPN1YHR027C AAC1P04710 309 aa3.02□□□□□ -1.93
RPN1YHR027C COS2P0CX12 379 aa3.02□□□□□ -1.93
RPN1YHR027C COS3P0CX13 379 aa3.02□□□□□ -1.93
RPN1YHR027C URA6P15700 204 aa3.02□□□□□ -1.93
RPN1YHR027C MET16P18408 261 aaPredicted RBP3.02□□□□□ -1.93
RPN1YHR027C CKS1P20486 150 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C RPS1BP23248 255 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C AAT2P23542 418 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C LAC1P28496 418 aa3.02□□□□□ -1.93
RPN1YHR027C FUN30P31380 1131 aa3.02□□□□□ -1.93
RPN1YHR027C RPS1AP33442 255 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C SRY1P36007 326 aa3.02□□□□□ -1.93
RPN1YHR027C SOL2P37262 315 aa3.02□□□□□ -1.93
RPN1YHR027C UIP3P39547 235 aa3.02□□□□□ -1.93
RPN1YHR027C NPR2P39923 615 aa3.02□□□□□ -1.93
RPN1YHR027C RSP5P39940 809 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C AVT2P39981 480 aa3.02□□□□□ -1.93
RPN1YHR027C PEP8P40335 379 aa3.02□□□□□ -1.93
RPN1YHR027C QDR1P40475 563 aa3.02□□□□□ -1.93
RPN1YHR027C JAC1P53193 184 aa3.02□□□□□ -1.93
RPN1YHR027C YGR168CP53293 376 aa3.02□□□□□ -1.93
RPN1YHR027C RPT4P53549 437 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C YNL095CP53932 642 aa3.02□□□□□ -1.93
RPN1YHR027C RCO1Q04779 684 aa3.02□□□□□ -1.93
RPN1YHR027C CST9Q06032 482 aa3.02□□□□□ -1.93
RPN1YHR027C FMP25Q08023 583 aa3.02□□□□□ -1.93
RPN1YHR027C SPC3Q12133 184 aa3.02□□□□□ -1.93
RPN1YHR027C YLL058WQ12198 575 aa3.02□□□□□ -1.93
RPN1YHR027C YOR114WQ12219 294 aa3.02□□□□□ -1.93
RPN1YHR027C LCB4Q12246 624 aa3.02□□□□□ -1.93
RPN1YHR027C PCC1Q3E833 88 aa3.02□□□□□ -1.93
RPN1YHR027C MPD2Q99316 277 aa3.02□□□□□ -1.93
RPN1YHR027C BNI1P41832 1953 aa3.02□□□□□ -1.93
RPN1YHR027C SPE1P08432 466 aa3.02□□□□□ -1.93
RPN1YHR027C RPI1P23250 407 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C DBR1P24309 405 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C DAL2P25335 343 aa3.02□□□□□ -1.93
RPN1YHR027C CSM1P25651 190 aa3.02□□□□□ -1.93
RPN1YHR027C ATP7P30902 174 aa3.02□□□□□ -1.93
RPN1YHR027C RNP1P32385 249 aa3.02□□□□□ -1.93
RPN1YHR027C MSN4P33749 630 aa3.02□□□□□ -1.93
RPN1YHR027C APT2P36973 181 aa3.02□□□□□ -1.93
RPN1YHR027C RRP3P38712 501 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C CYC2P38909 366 aa3.02□□□□□ -1.93
RPN1YHR027C LAS21P40367 830 aa3.02□□□□□ -1.93
RPN1YHR027C LOC1P43586 204 aaPredicted RBP3.02□□□□□ -1.93
RPN1YHR027C SIP4P46954 829 aa3.02□□□□□ -1.93
RPN1YHR027C ASG7P46993 209 aa3.02□□□□□ -1.93
RPN1YHR027C ADO1P47143 340 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C MNN10P50108 393 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C RHO3Q00245 231 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C SPR6Q01684 191 aa3.02□□□□□ -1.93
RPN1YHR027C SMA1Q02651 245 aa3.02□□□□□ -1.93
RPN1YHR027C GRX5Q02784 150 aa3.02□□□□□ -1.93
RPN1YHR027C HSP31Q04432 237 aa3.02□□□□□ -1.93
RPN1YHR027C NEJ1Q06148 342 aa3.02□□□□□ -1.93
RPN1YHR027C HFI1Q12060 488 aa3.02□□□□□ -1.93
RPN1YHR027C FYV7Q12247 151 aa3.02□□□□□ -1.93
RPN1YHR027C YLR108CQ12259 485 aa3.02□□□□□ -1.93
RPN1YHR027C PST2Q12335 198 aaKnown RBP3.02□□□□□ -1.93
RPN1YHR027C RTN2Q12443 393 aa3.02□□□□□ -1.93
RPN1YHR027C STF1P01098 86 aa3.01□□□□□ -1.93
RPN1YHR027C RPL4AP10664 362 aaKnown RBP3.01□□□□□ -1.93
RPN1YHR027C PDC2P32896 925 aa3.01□□□□□ -1.93
RPN1YHR027C FLO10P36170 1169 aa3.01□□□□□ -1.93
RPN1YHR027C MBA1P38300 278 aa3.01□□□□□ -1.93
RPN1YHR027C PHO89P38361 574 aa3.01□□□□□ -1.93
RPN1YHR027C PAC1P39946 494 aaKnown RBP3.01□□□□□ -1.93
RPN1YHR027C PGD1P40356 397 aa3.01□□□□□ -1.93
RPN1YHR027C HIS6P40545 261 aa3.01□□□□□ -1.93
RPN1YHR027C MRX5P47007 382 aa3.01□□□□□ -1.93
RPN1YHR027C MPS3P47069 682 aa3.01□□□□□ -1.93
RPN1YHR027C RPL4BP49626 362 aaKnown RBP3.01□□□□□ -1.93
RPN1YHR027C TAF4P50105 388 aa3.01□□□□□ -1.93
RPN1YHR027C NCS6P53088 359 aa3.01□□□□□ -1.93
RPN1YHR027C MRPS17Q03246 237 aaPredicted RBP3.01□□□□□ -1.93
RPN1YHR027C YLR345WQ06137 509 aa3.01□□□□□ -1.93
RPN1YHR027C PML1Q07930 204 aaPredicted RBP3.01□□□□□ -1.93
RPN1YHR027C RRP40Q08285 240 aaKnown RBP3.01□□□□□ -1.93
RPN1YHR027C YOL159CQ08300 171 aa3.01□□□□□ -1.93
RPN1YHR027C TRE2Q08693 809 aa3.01□□□□□ -1.93
RPN1YHR027C YPL066WQ12194 479 aa3.01□□□□□ -1.93
RPN1YHR027C RBD2Q12270 262 aa3.01□□□□□ -1.93
RPN1YHR027C TMA7Q3E764 64 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms