RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	DDC1	Q08949	612 aa		4.42	□□□□□ -1.7
MDR1	YGR100W	NMD4	Q12129	218 aa		4.42	□□□□□ -1.7
MDR1	YGR100W	RKM5	Q12367	367 aa		4.42	□□□□□ -1.7
MDR1	YGR100W	TRM10	Q12400	293 aa		4.42	□□□□□ -1.7
MDR1	YGR100W	PCC1	Q3E833	88 aa		4.42	□□□□□ -1.7
MDR1	YGR100W	HSH49	Q99181	213 aa	Predicted RBP	4.42	□□□□□ -1.7
MDR1	YGR100W	PNO1	Q99216	274 aa	Known RBP	4.42	□□□□□ -1.7
MDR1	YGR100W	MOD5	P07884	428 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	GCD1	P09032	578 aa	Predicted RBP	4.41	□□□□□ -1.7
MDR1	YGR100W	SEC12	P11655	471 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	YCL049C	P25577	312 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	LIP5	P32875	414 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	SDH3	P33421	198 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	SEF1	P34228	1148 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	OAR1	P35731	278 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	SOL2	P37262	315 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	SHG1	P38337	142 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	XDJ1	P39102	459 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	VAB2	P40003	282 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	PAN6	P40459	309 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	YFL012W	P43580	148 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	SIP4	P46954	829 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	UFD1	P53044	361 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	REG1	Q00816	1014 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	RPA49	Q01080	415 aa	Predicted RBP	4.41	□□□□□ -1.7
MDR1	YGR100W	CWC27	Q02770	301 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	ERO1	Q03103	563 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	PML39	Q03760	334 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	BCH1	Q05029	724 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	HDA2	Q06629	674 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	THI73	Q07904	523 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	HFI1	Q12060	488 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	ATX2	Q12067	313 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	DIN7	Q12086	430 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	SFM1	Q12314	213 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	CTT1	P06115	562 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	COS2	P0CX12	379 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	COS3	P0CX13	379 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	RPP1B	P10622	106 aa	Known RBP	4.41	□□□□□ -1.7
MDR1	YGR100W	SLY1	P22213	666 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	DBP1	P24784	617 aa	Known RBP	4.41	□□□□□ -1.7
MDR1	YGR100W	NGR1	P32831	672 aa	Known RBP	4.41	□□□□□ -1.7
MDR1	YGR100W	FLO10	P36170	1169 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	AHP1	P38013	176 aa	Known RBP	4.41	□□□□□ -1.7
MDR1	YGR100W	YBR013C	P38215	129 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	PAN5	P38787	379 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	SOP4	P39543	234 aa	Predicted RBP	4.41	□□□□□ -1.7
MDR1	YGR100W	RPN3	P40016	523 aa	Known RBP	4.41	□□□□□ -1.7
MDR1	YGR100W	ARC1	P46672	376 aa	Known RBP	4.41	□□□□□ -1.7
MDR1	YGR100W	HLJ1	P48353	224 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	SOK2	P53438	785 aa	Predicted RBP	4.41	□□□□□ -1.7
MDR1	YGR100W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
MDR1	YGR100W	PEX13	P80667	386 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	SPR6	Q01684	191 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	PEX12	Q04370	399 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	AIM33	Q04516	312 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	YLR271W	Q06152	274 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	PHO92	Q06390	306 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	SYT1	Q06836	1226 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	SLD7	Q08457	257 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	MED1	Q12321	566 aa		4.41	□□□□□ -1.7
MDR1	YGR100W	CET1	O13297	549 aa	Predicted RBP	4.4	□□□□□ -1.7
MDR1	YGR100W	MRPL44	P19956	98 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	TRX1	P22217	103 aa	Known RBP	4.4	□□□□□ -1.7
MDR1	YGR100W	GUT1	P32190	709 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	PDC2	P32896	925 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	SSS1	P35179	80 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	YKL162C	P36052	402 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	GEP4	P38812	185 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	NSG1	P38837	291 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	ACO2	P39533	789 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	RSP5	P39940	809 aa	Known RBP	4.4	□□□□□ -1.7
MDR1	YGR100W	PCL6	P40038	420 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	LSM4	P40070	187 aa	Known RBP	4.4	□□□□□ -1.7
MDR1	YGR100W	CLA4	P48562	842 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	ECM9	Q02202	377 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	YPL113C	Q02961	396 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	EFR3	Q03653	782 aa	Known RBP	4.4	□□□□□ -1.7
MDR1	YGR100W	TRM12	Q04235	462 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	YHC1	Q05900	231 aa	Known RBP	4.4	□□□□□ -1.7
MDR1	YGR100W	ARO10	Q06408	635 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	NBA1	Q08229	501 aa	Known RBP	4.4	□□□□□ -1.7
MDR1	YGR100W	YPR063C	Q12160	140 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	YOR022C	Q12204	715 aa		4.4	□□□□□ -1.7
MDR1	YGR100W	CDC28	P00546	298 aa	Known RBP	4.4	□□□□□ -1.71
MDR1	YGR100W	ADE1	P27616	306 aa		4.4	□□□□□ -1.71
MDR1	YGR100W	SRB6	P32570	121 aa		4.4	□□□□□ -1.71
MDR1	YGR100W	ABD1	P32783	436 aa	Predicted RBP	4.4	□□□□□ -1.71
MDR1	YGR100W	YBL029W	P38201	376 aa		4.4	□□□□□ -1.71
MDR1	YGR100W	MNL1	P38888	796 aa		4.4	□□□□□ -1.71
MDR1	YGR100W	FAD1	P38913	306 aa		4.4	□□□□□ -1.71
MDR1	YGR100W	ERV46	P39727	415 aa		4.4	□□□□□ -1.71
MDR1	YGR100W	YEN1	P40028	759 aa		4.4	□□□□□ -1.71
MDR1	YGR100W	IDP3	P53982	420 aa	Known RBP	4.4	□□□□□ -1.71
MDR1	YGR100W	YDC1	Q02896	317 aa		4.4	□□□□□ -1.71
MDR1	YGR100W	CAC2	Q04199	468 aa		4.4	□□□□□ -1.71
MDR1	YGR100W	YLR179C	Q06252	201 aa	Known RBP	4.4	□□□□□ -1.71
MDR1	YGR100W	YOR059C	Q08448	450 aa	Known RBP	4.4	□□□□□ -1.71
MDR1	YGR100W	YLL058W	Q12198	575 aa		4.4	□□□□□ -1.71
MDR1	YGR100W	FYV7	Q12247	151 aa		4.4	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms