RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W HOC1P47124 396 aa5.17□□□□□ -1.58
CDC43YGL155W FOL2P51601 243 aaKnown RBP5.17□□□□□ -1.58
CDC43YGL155W YGR015CP53208 328 aa5.17□□□□□ -1.58
CDC43YGL155W SNF12P53628 566 aa5.17□□□□□ -1.58
CDC43YGL155W YNR014WP53719 212 aa5.17□□□□□ -1.58
CDC43YGL155W NUP49Q02199 472 aa5.17□□□□□ -1.58
CDC43YGL155W YPL071CQ02864 156 aa5.17□□□□□ -1.58
CDC43YGL155W PIR1Q03178 341 aa5.17□□□□□ -1.58
CDC43YGL155W YMR178WQ03219 274 aaKnown RBP5.17□□□□□ -1.58
CDC43YGL155W YMD8Q03697 442 aa5.17□□□□□ -1.58
CDC43YGL155W RNH1Q04740 348 aa5.17□□□□□ -1.58
CDC43YGL155W YLR345WQ06137 509 aa5.17□□□□□ -1.58
CDC43YGL155W ARR1Q06596 294 aa5.17□□□□□ -1.58
CDC43YGL155W BRE4Q07660 1125 aa5.17□□□□□ -1.58
CDC43YGL155W SGO1Q08490 590 aa5.17□□□□□ -1.58
CDC43YGL155W SMF3Q12078 473 aaPredicted RBP5.17□□□□□ -1.58
CDC43YGL155W YPL245WQ12179 454 aaKnown RBP5.17□□□□□ -1.58
CDC43YGL155W YPR011CQ12251 326 aa5.17□□□□□ -1.58
CDC43YGL155W RBD2Q12270 262 aa5.17□□□□□ -1.58
CDC43YGL155W YLR422WQ06409 1932 aa5.17□□□□□ -1.58
CDC43YGL155W UBR1P19812 1950 aa5.16□□□□□ -1.58
CDC43YGL155W PHO5P00635 467 aa5.16□□□□□ -1.58
CDC43YGL155W PET122P10355 254 aa5.16□□□□□ -1.58
CDC43YGL155W DBP3P20447 523 aaKnown RBP5.16□□□□□ -1.58
CDC43YGL155W RRP7P25368 297 aaPredicted RBP5.16□□□□□ -1.58
CDC43YGL155W RER1P25560 188 aa5.16□□□□□ -1.58
CDC43YGL155W PTC6P25646 442 aa5.16□□□□□ -1.58
CDC43YGL155W CAT2P32796 670 aaKnown RBP5.16□□□□□ -1.58
CDC43YGL155W SPO23P33757 523 aa5.16□□□□□ -1.58
CDC43YGL155W ARA1P38115 344 aa5.16□□□□□ -1.58
CDC43YGL155W ATG7P38862 630 aa5.16□□□□□ -1.58
CDC43YGL155W BUR6P40096 142 aa5.16□□□□□ -1.58
CDC43YGL155W NTA1P40354 457 aa5.16□□□□□ -1.58
CDC43YGL155W QDR1P40475 563 aa5.16□□□□□ -1.58
CDC43YGL155W SER33P40510 469 aa5.16□□□□□ -1.58
CDC43YGL155W YFR018CP43599 363 aa5.16□□□□□ -1.58
CDC43YGL155W RET2P43621 546 aa5.16□□□□□ -1.58
CDC43YGL155W BIT61P47041 543 aa5.16□□□□□ -1.58
CDC43YGL155W MNT2P53059 558 aa5.16□□□□□ -1.58
CDC43YGL155W RAI1P53063 387 aaKnown RBP5.16□□□□□ -1.58
CDC43YGL155W ARO8P53090 500 aaKnown RBP5.16□□□□□ -1.58
CDC43YGL155W VAC7P53950 1165 aa5.16□□□□□ -1.58
CDC43YGL155W YMR034CQ05131 434 aaPredicted RBP5.16□□□□□ -1.58
CDC43YGL155W SPO77Q06134 477 aa5.16□□□□□ -1.58
CDC43YGL155W TRM8Q12009 286 aa5.16□□□□□ -1.58
CDC43YGL155W YGK3Q12222 375 aaPredicted RBP5.16□□□□□ -1.58
CDC43YGL155W RGT2Q12300 763 aa5.16□□□□□ -1.58
CDC43YGL155W PST1Q12355 444 aa5.16□□□□□ -1.58
CDC43YGL155W GPR1Q12361 961 aa5.16□□□□□ -1.58
CDC43YGL155W NSI1Q12457 570 aa5.16□□□□□ -1.58
CDC43YGL155W PRC1P00729 532 aa5.15□□□□□ -1.59
CDC43YGL155W PUT2P07275 575 aa5.15□□□□□ -1.59
CDC43YGL155W LAT1P12695 482 aaKnown RBP5.15□□□□□ -1.59
CDC43YGL155W TFS1P14306 219 aa5.15□□□□□ -1.59
CDC43YGL155W THR1P17423 357 aaKnown RBP5.15□□□□□ -1.59
CDC43YGL155W RPL24BP24000 155 aaKnown RBP5.15□□□□□ -1.59
CDC43YGL155W PHO84P25297 587 aaKnown RBP5.15□□□□□ -1.59
CDC43YGL155W PXA2P34230 853 aa5.15□□□□□ -1.59
CDC43YGL155W LOT5P34234 306 aa5.15□□□□□ -1.59
CDC43YGL155W MPM1P40364 252 aa5.15□□□□□ -1.59
CDC43YGL155W YGR201CP42936 225 aa5.15□□□□□ -1.59
CDC43YGL155W ALR2P43553 858 aa5.15□□□□□ -1.59
CDC43YGL155W IRC6P43615 237 aa5.15□□□□□ -1.59
CDC43YGL155W PMT4P46971 762 aa5.15□□□□□ -1.59
CDC43YGL155W SSY5P47002 699 aa5.15□□□□□ -1.59
CDC43YGL155W MSE1P48525 536 aa5.15□□□□□ -1.59
CDC43YGL155W CWC23P52868 283 aaPredicted RBP5.15□□□□□ -1.59
CDC43YGL155W YGR168CP53293 376 aa5.15□□□□□ -1.59
CDC43YGL155W FRE4P53746 719 aa5.15□□□□□ -1.59
CDC43YGL155W IGO1P53897 168 aa5.15□□□□□ -1.59
CDC43YGL155W TGL2P54857 326 aa5.15□□□□□ -1.59
CDC43YGL155W OAZ1Q02803 292 aa5.15□□□□□ -1.59
CDC43YGL155W SEG1Q04279 960 aa5.15□□□□□ -1.59
CDC43YGL155W GAD1Q04792 585 aa5.15□□□□□ -1.59
CDC43YGL155W BSC2Q05611 235 aa5.15□□□□□ -1.59
CDC43YGL155W YLR257WQ06146 321 aaKnown RBP5.15□□□□□ -1.59
CDC43YGL155W SWA2Q06677 668 aa5.15□□□□□ -1.59
CDC43YGL155W YLR126CQ12288 251 aa5.15□□□□□ -1.59
CDC43YGL155W YBL113CQ7M4S9 792 aa5.15□□□□□ -1.59
CDC43YGL155W YPR096CO13587 100 aa5.14□□□□□ -1.59
CDC43YGL155W CAP2P13517 287 aa5.14□□□□□ -1.59
CDC43YGL155W MDH1P17505 334 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
CDC43YGL155W EPT1P22140 391 aa5.14□□□□□ -1.59
CDC43YGL155W BUD5P25300 642 aaPredicted RBP5.14□□□□□ -1.59
CDC43YGL155W SLM5P25345 492 aaKnown RBP5.14□□□□□ -1.59
CDC43YGL155W RSC6P25632 483 aa5.14□□□□□ -1.59
CDC43YGL155W CTS1P29029 562 aa5.14□□□□□ -1.59
CDC43YGL155W ASF2P32448 525 aaPredicted RBP5.14□□□□□ -1.59
CDC43YGL155W ATP11P32453 318 aa5.14□□□□□ -1.59
CDC43YGL155W HXT4P32467 576 aa5.14□□□□□ -1.59
CDC43YGL155W STE5P32917 917 aa5.14□□□□□ -1.59
CDC43YGL155W GPX2P38143 162 aa5.14□□□□□ -1.59
CDC43YGL155W ALG14P38242 237 aa5.14□□□□□ -1.59
CDC43YGL155W INM1P38710 295 aa5.14□□□□□ -1.59
CDC43YGL155W VMA22P38784 181 aa5.14□□□□□ -1.59
CDC43YGL155W YHR127WP38833 243 aaKnown RBP5.14□□□□□ -1.59
CDC43YGL155W MDM31P38880 579 aa5.14□□□□□ -1.59
CDC43YGL155W HXT6P39003 570 aaKnown RBP5.14□□□□□ -1.59
CDC43YGL155W HXT7P39004 570 aa5.14□□□□□ -1.59
CDC43YGL155W HEM14P40012 539 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms